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SCN18_30_10_14_R2_B_scaffold_16312_5

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(3614..4813)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46M45_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 398.0
  • Bit_score: 514
  • Evalue 6.10e-143
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 398.0
  • Bit_score: 514
  • Evalue 1.70e-143
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AAZ65785.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 398.0
  • Bit_score: 514
  • Evalue 8.60e-143

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGTCGCTCGCGGCGTCGGCTGCGTTCGCGGCGGCAATGACATTGACCCCGATGGGAGCGCGGGCCGACGAGAGCCCCATCAAGATCGGCCTTACCACCGACCTCACCGGCATCGCGGCCACCTACGCGGCGGCGCAGGTCAATGCGGTCAAGATGGCAATCGACGAAATCAATGAAGCCGGCGGCGTCAAGGGCCGCAAGCTTGAGCTTCTCGTCCGGGACTCGCAATTGAAGCCTGCGCTGGGCGCCAGCCTCACGCGTGACCTCATCGTTCGCGAAAAGATCGACTACCTGATCGGTCCCGACGCAAGTTCGGTCGGCGTCGCGGTAAGCGGTGTCGCGAAGCAGTACAAGAAGGTCGTCGTCATGACGATCCCCAACACGCCGCGCCTGACGGGCGAGCTCTTCCATAAATACTTCTTCACCATCGTCCCGAGCGGCACGATGCTGGCGCGGGCCATGGCGGAAGGTATCGGCAAGGACAACAGCAAGATCGCATTCATCGGAGGCGACTACGAGGCCTCGCATCAGGCGATCGGGTATTTCACCGATTGGCTCGCCAAGGTTAATCCGAATGCCAAGGTAGTGGACCAGCAATGGCCGAAGCTGGGCGAACAAGACTTTACGCCGTATATCACGCAGCTCATGTCATCGAAGCCGGACATCGTCTTCTCCTATCTCTGGGGAGCGGACCTGATCGCCTTCATCAAGCAGGCCAAGCCTTACGGTCTCTTCGACAAGACCAAATTCGCCACGCTGCTTTTCCTGGATGACCTGAAGGCGCTGGGCAACGATATGCCTGATGGGATCATAGGGCAGATGTATGCGCCTCCGTTCGGTACGGATAGCCCGGCCATGTCGGAGTTCATCAAGAAATACCAGGCGAAGTACAATTCATTCCCCTCCGACTGGGCTGTGATGGGCTATGACGGCATGCGCATCCTGGCCGACGGCATAAAGAACGCTCCGTCCATGGATTCGGATGCTGTCGCGGACGCCATCGCCAAGTTGAAGTTCGACGGATTGCAGGGACCGCTGACCTTCCGTGAGGTGGATCATCAGGCGAATGTGCCCTCGTTCCTCGGTACGACCGGGAAGGTCGAGGGGCTGCCCTTCAAGGGACTGGTCGACATCAAGCGCATTCCCGCCGAGACCGTCTGGCCGACGCCCGAGGAAATCCTGGCCCAGCGCAAGAGCTGA
PROTEIN sequence
Length: 400
MSLAASAAFAAAMTLTPMGARADESPIKIGLTTDLTGIAATYAAAQVNAVKMAIDEINEAGGVKGRKLELLVRDSQLKPALGASLTRDLIVREKIDYLIGPDASSVGVAVSGVAKQYKKVVVMTIPNTPRLTGELFHKYFFTIVPSGTMLARAMAEGIGKDNSKIAFIGGDYEASHQAIGYFTDWLAKVNPNAKVVDQQWPKLGEQDFTPYITQLMSSKPDIVFSYLWGADLIAFIKQAKPYGLFDKTKFATLLFLDDLKALGNDMPDGIIGQMYAPPFGTDSPAMSEFIKKYQAKYNSFPSDWAVMGYDGMRILADGIKNAPSMDSDAVADAIAKLKFDGLQGPLTFREVDHQANVPSFLGTTGKVEGLPFKGLVDIKRIPAETVWPTPEEILAQRKS*