ggKbase home page

SCN18_30_10_14_R2_B_scaffold_15533_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2975..4066)

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036FFDF6 similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 366.0
  • Bit_score: 334
  • Evalue 1.30e-88
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 366.0
  • Bit_score: 328
  • Evalue 1.60e-87
ABC transporter {ECO:0000313|EMBL:EJZ21479.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 363.0
  • Bit_score: 328
  • Evalue 6.10e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGCACGCATTGAACTGCGTAACATCGTCAAGACCTATGGCGGCTTCAATGCCGTCCAGAACCTCGACATGACGATCGAAGACGGGGAGCTTCTGGTTCTCCTCGGACCGTCCGGCTGCGGCAAGTCCACGACGATGAACATGGTCGCCGGCTTGACGGATCCGACGTCCGGCCAGATTCTGTTCGACGGCGTCGACGTCACTCAGCGCTCCCCCCACGAGCGCAACATCGCGATGGTGTTCCAGTCGTCGCTGCTCTATCCGCACCTGTCGGCGCACGACAACATCTATATGAGCCTCAAGCGCTCCGGCCTGTCCAAGCAGGAAATAGAGGCCCGCATTGCGCGTGCCGCCGAGACGGTCGACGTCACCCGCCTTCTCGACAAGCTGCCTTCGCAGCTTTCGGGCGGCGAGCGCCAGCGCATCGCCACCGCCAAGGCGATCGTGCGCGAGCCCGCCGGCTTCCTGCTCGACGAGCCTCTGTCGGCGCTGGATGCCTCGCTCAGGCTTTCGCTGCGCGCCGAGCTCGTCAATCTCCAGAAGCGTATCCGCACCACCATGATCTTCGTCACCCACGACCAGATCGAGGCGATGACGATGGGCGACCGCATCGTGGTGATGAACGAGGGGCGGATCCAGCAAGTCGGCACGCCGGACGAACTTTACGATTCTCCCGCCAACAAATTCGTCGCTTCCTTCATTGGCACACCGGCCATGGGCTTCCTCTCCTGCCGTGTCGAGCAAAGCGGCGAGGAGGTGAAGCTCATAAGCGACAGCGTGACGATCCGGCTCCAGCCGGAGCAGGCGCGGGCAGTCACCCGATCAGGCGCCGGACGCATCCTGGTCGGCATCCGCCCGGAGCGGCTGACGCTCGGCGAAAACGCTGCGGCGGATTGGTCGGTTCACGGCGTCGTCGAGGTCGTGGAAATGCTGGGTTCAGAGCAATATGTGCATTTCAATGTCGATGGCGGGACACTGACCGCGCGTGTGTCACGCGACCATCCCGTGAAGGTCCAGCAATCCGTTCTTTTTTCGGGCGCGGCCGAGCATCTTCATCTCTTCGATGAAGCTACCGGCCGGACCCTTTCCTGA
PROTEIN sequence
Length: 364
MARIELRNIVKTYGGFNAVQNLDMTIEDGELLVLLGPSGCGKSTTMNMVAGLTDPTSGQILFDGVDVTQRSPHERNIAMVFQSSLLYPHLSAHDNIYMSLKRSGLSKQEIEARIARAAETVDVTRLLDKLPSQLSGGERQRIATAKAIVREPAGFLLDEPLSALDASLRLSLRAELVNLQKRIRTTMIFVTHDQIEAMTMGDRIVVMNEGRIQQVGTPDELYDSPANKFVASFIGTPAMGFLSCRVEQSGEEVKLISDSVTIRLQPEQARAVTRSGAGRILVGIRPERLTLGENAAADWSVHGVVEVVEMLGSEQYVHFNVDGGTLTARVSRDHPVKVQQSVLFSGAAEHLHLFDEATGRTLS*