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SCN18_30_10_14_R2_B_scaffold_20374_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1028..1813

Top 3 Functional Annotations

Value Algorithm Source
Putative GntR-family transcriptional regulator n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX03_PELBH similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 255.0
  • Bit_score: 249
  • Evalue 2.40e-63
Putative GntR-family transcriptional regulator {ECO:0000313|EMBL:EAU48399.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 255.0
  • Bit_score: 249
  • Evalue 3.40e-63
Transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 249.0
  • Bit_score: 228
  • Evalue 1.20e-57

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
GTGGCCCGAGCTGCCTTAATCAACGATTCGGTCACCCCCTTGCACCATCAGGTGTATGTGGTGATGCGCCAACAGATCGAAGAGGGCCAATATTACGGCGAGAAGCCGATCCCCTCCGAGCACGAGCTGTCGCAAACATTCCAAGTATCGCGGATTACGATCCGTCGCGCGCTCGACAGGCTCAAGCAGGAGGGCTTCGTTAGCCGCGCGCGGGGGCGCGGGACATTCGCCCGATCCCCAGAAATCCCTCAGGCGATCTCGGCAAACCTGCGCGGGATTTTCGAGAACCTGCTGGCAATGGGTTTGCGGACCCGCGTCAAGCTAATCGAGTTCGGCTATATGCCGGCGACGCCCATGATCGCCGCCAAGCTCCTGCTGGAGCCGGGCGCCATGGTGCAGCGTGCGGTGCGTGTCCGCTACCACAAGGATATTCCCTTCTCCCATCTGACAACCTATCTCCCGGAGGATATCGGCCGTCATTGCGACGAGCAGGAACTCTCCGACAAGCCGTTGCTGCTCCTGATGGAGCGCGCCGGCATCAAGGTTTCGGCCGCCGATCAATCGGTCTCGGCGAAGCTGGCCGACACGATCGTTGCCCCGCTACTGCAAATCGAAACCGGCTCGCCGCTCCTGTGGGTCAAGCGCCTCGTCCTTGATCAGGACGATCGGCCGGTCGAGTATCTCCACGCGCTCTATCGGCCCGACATCTACGAATACCAAATGAGCATGTCGCGTGTCGAAGGCGAACAGGCGTCGCTCTGGAGACCAGACGCGACGCAAACATGA
PROTEIN sequence
Length: 262
VARAALINDSVTPLHHQVYVVMRQQIEEGQYYGEKPIPSEHELSQTFQVSRITIRRALDRLKQEGFVSRARGRGTFARSPEIPQAISANLRGIFENLLAMGLRTRVKLIEFGYMPATPMIAAKLLLEPGAMVQRAVRVRYHKDIPFSHLTTYLPEDIGRHCDEQELSDKPLLLLMERAGIKVSAADQSVSAKLADTIVAPLLQIETGSPLLWVKRLVLDQDDRPVEYLHALYRPDIYEYQMSMSRVEGEQASLWRPDATQT*