ggKbase home page

SCN18_30_10_14_R2_B_scaffold_27929_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 49..1269

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 406.0
  • Bit_score: 761
  • Evalue 3.10e-217
PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19C8B similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 416.0
  • Bit_score: 755
  • Evalue 2.70e-215
tryptophan synthase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 416.0
  • Bit_score: 745
  • Evalue 8.00e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
GTGAACAAGCCGGCGTCACCCAATTCCTTCCGTACCGGACCCGACGAGCAGGGCATGTTCGGCATTTTCGGCGGCCGCTTCGTCGCCGAGACGCTGATGCCACTCATCCTCGACCTCGAGCATGAGTGGAACGCCGCCAAGAATGATCCGGCCTTTCGGGCTGAACTGGAGGGGCTTTCGACCTTCTACGCCGGCCGGCCATCGAAGCTCTACTTCGCCGAAGGCCTGACGAAGCATCTCGGCGGCGCGAAGATCTATTTCAAGCGCGAGGATCTGAACCATACCGGCTCGCACAAGATCAACAATTGCCTCGGCCAGATCCTGCTTGCGCGGCGCATGGGCAAGAAGCGCATCATTGCGGAGACCGGCGCCGGCCAGCACGGCGTCGCCTCGGCGACCGTCTCGGCGCGCTTCGGCCTGCCTTGCGTCGTCTATATGGGCGCGACCGATGTCGAGCGACAGAAGCCGAACGTCTTCCGCATGAAACTGCTCGGCGCCGAGGTCAAGCCGGTCGCGGCCGGCCACGGCACGCTGAAAGACGCCATGAACGAGGCCCTTCGGGACTGGGTGACCAATGTCGAAGACACCTATTACCTGATCGGCACGGCGGCGGGGCCGCATCCCTATCCGGAGATGGTGCGCGAGTTCCAGTCCGTCATCGGCAAGGAGGCGCGCACGCAGATCCTCGAACAGGAAGGGCGCCTGCCGGACGTCATCGTCGCGGCGGTCGGGGGCGGCTCGAACGCCATCGGCCTCTTCCATCCCTTTCTCGACGATCGCGAGGTGAAGATCATCGGCATCGAGGCCGGCGGGCATGGGCTGGATGGCGACGAGCACTGCGCCTCGATGAATGCCGGCAAGCCGGGCGTACTCCACGGCAACCGCACCTACCTGCTCCAGAACGAGGACGGGCAGATCAAGGACGGCCATTCGATCTCGGCCGGGCTCGACTATCCGGGCGTCGGGCCGGAACATTCGTGGCTGCGCGATACGGGCCGTGTCGAATACGTGCCGATCCTCGACGACGAGGCGCTTGAAGCCTTCCAGGTGACGACGAAGGTGGAGGGCATCATCCCGGCGCTCGAATCGGCGCATGCCATCGCGCACGCCATGAAGATCGCGCCGAAGATGACGAAGGACGAGATCGTCATCGTCAATCTTTCCGGCCGCGGCGACAAGGACGTGCACACCGTGGCCAGCATGATGGGCATGGAGATCTGA
PROTEIN sequence
Length: 407
VNKPASPNSFRTGPDEQGMFGIFGGRFVAETLMPLILDLEHEWNAAKNDPAFRAELEGLSTFYAGRPSKLYFAEGLTKHLGGAKIYFKREDLNHTGSHKINNCLGQILLARRMGKKRIIAETGAGQHGVASATVSARFGLPCVVYMGATDVERQKPNVFRMKLLGAEVKPVAAGHGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPEMVREFQSVIGKEARTQILEQEGRLPDVIVAAVGGGSNAIGLFHPFLDDREVKIIGIEAGGHGLDGDEHCASMNAGKPGVLHGNRTYLLQNEDGQIKDGHSISAGLDYPGVGPEHSWLRDTGRVEYVPILDDEALEAFQVTTKVEGIIPALESAHAIAHAMKIAPKMTKDEIVIVNLSGRGDKDVHTVASMMGMEI*