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SCN18_30_10_14_R2_B_scaffold_32823_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1401..3191)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE85DD related cluster n=1 Tax=unknown RepID=UPI0003CE85DD similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 512.0
  • Bit_score: 541
  • Evalue 9.10e-151
polysaccharide biosynthesis protein CapD similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 508.0
  • Bit_score: 541
  • Evalue 2.60e-151
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ESY71543.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 512.0
  • Bit_score: 541
  • Evalue 1.30e-150

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1791
TTTACGTTCATCTCCATCCCTCGGTTGCTCTATCGCTACCTTAGGGAGGGTTCGAGCTGGATCTATGGGAAGGATACCGCTTCCGGAAGGGAGTGGAAACGGGCCCTGTTTTTGGGTTCGCTGGAAGAAGCGGATGTCATCATCAGCTATACCCGGGCCAACCTCCATGATTTCACGCGCATCATCGGCATCATAACAAGTGACCCCCGGGCGACTGTCGGCACGAATATCCAGGGCGTGCCGATCGTAAGCCTGGCCTATCGTGCGTCGCAGACCCTTGACGAATATTTCAAGGACACCGAGGGCCTGAACATCGTTATTTTCGGCCATGAGGCCGACAAGACTTTTCCCTACTTTCCGGAACTGGTCCGCATCGCCCGCCGAGGCGGGGCATCCGTTGAGCAATTTGCCGGCCTTTCCAATCTGCGGCGCAGCGGCAAGCTCACCATGGAAAGGGTGGAGATGGAGACCATCCTGCGCCGCTCGACCGTTCCGTCGGATCACGACCGCCTCGCCGCATTCATGAAGCACAAAAGAGTGCTCGTCACAGGCGGCGCGGGATCGATCGGCCGGGTCCTCGTCCGGCGCGCGCTGAATCTGGGCGCGGAAGCGGTCATGGTCGCAGACATCTCCGAATTCAATATATTCAGCCTGCAGACCGGCTATCTGGACAAAAAGGATTTGCCACGGGTAGCGCTGCGCATTCTCGATATCCGCGACGAGCGCCAGCTTTCATCTGCTGTAAAGCAATTCCGGCCGGACATCATTTTCCACGCGGCGGCGTTGAAGCATGTACCGCTGCTTGAGGAGAATTGGGATGCCGCCGTCAAGACGAATGTCTTCGGCACGCTGAATTGCGTCAAGGCCGCGGTGGAGTGCGCCGTTTCTCAATTCGTTCTGATTTCGAGCGACAAGGCTGCCGATCCCCGGTCGATCCTCGGCCTCACGAAATTGATGGCCGAGCACGTCACCAGCGCCATGCGTTCCCGGCTTGCCGCCGACGCTTCCGCTCGCTCGCCGACGAATTTGATCGGCGTGCGGTTCGGCAACGTGTTCGGAAGCGACGGTTCCGTATCAACCATATTCCAGAACCAGATCGATGCTGGGGGGCCGGTTACCGTCACCGATCCGTTGATGACGCGCTATCTGATGACGATTGGCGAAGCCGTAGATCTCGTCATAGTGGCGGCCACCACATCCGCGATGAAGCGCGACGATGTGAGCCATGGCATCTACATGCTGGACATGGGGGAGCCGGTTTCGATCCTGACCGTGGCGGAAAACATGATCAGGCTTTCGGGCAAGAGGCCCTATCAGGACATCGAAATAGTCATAACGGGGAAACGTCCCGGCGAGAAACTGCATGAATCGCTTTGCGCGCCCGGCGAACAGATGATCGACGTAGGCGCGCCCAATGTTTTCGGGCTACGCACTTCTGTCTTCGGCTGGGAGGAAATCCAGACTGTTCTCGATGCGCTGGGCGAAGCCCTCCGCAACGGTGACAAGCGGCAGGCGCGAACGATCATGGAGGAATTTTGCAGCCCGGAAAGTCAGCTTCGTCCGCGCCTAATGTCGTCGGTATCGCGGACGTCCCCGACAGCCCTCCGTCCGCTCCGGACACCCTTGGCACCCGCCCGGTCCCGTCATCGGCGAATGAGGGTTCCCCATACGAATCGTCCATCGTCAACCTCAAGCGGTCGCATCCATCGATCACGACGGAACGGCAGGGCGAGGCGCCTCCTCCCCCAGCCCGCGCTATTGGTGAAGCCGGTTCCTGACGAACGTTCGTGA
PROTEIN sequence
Length: 597
FTFISIPRLLYRYLREGSSWIYGKDTASGREWKRALFLGSLEEADVIISYTRANLHDFTRIIGIITSDPRATVGTNIQGVPIVSLAYRASQTLDEYFKDTEGLNIVIFGHEADKTFPYFPELVRIARRGGASVEQFAGLSNLRRSGKLTMERVEMETILRRSTVPSDHDRLAAFMKHKRVLVTGGAGSIGRVLVRRALNLGAEAVMVADISEFNIFSLQTGYLDKKDLPRVALRILDIRDERQLSSAVKQFRPDIIFHAAALKHVPLLEENWDAAVKTNVFGTLNCVKAAVECAVSQFVLISSDKAADPRSILGLTKLMAEHVTSAMRSRLAADASARSPTNLIGVRFGNVFGSDGSVSTIFQNQIDAGGPVTVTDPLMTRYLMTIGEAVDLVIVAATTSAMKRDDVSHGIYMLDMGEPVSILTVAENMIRLSGKRPYQDIEIVITGKRPGEKLHESLCAPGEQMIDVGAPNVFGLRTSVFGWEEIQTVLDALGEALRNGDKRQARTIMEEFCSPESQLRPRLMSSVSRTSPTALRPLRTPLAPARSRHRRMRVPHTNRPSSTSSGRIHRSRRNGRARRLLPQPALLVKPVPDERS*