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SCN18_30_10_14_R5_P_scaffold_1245_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1289..2164)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1A3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 271.0
  • Bit_score: 406
  • Evalue 1.70e-110
Peptide ABC transporter permease {ECO:0000313|EMBL:KEJ97488.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 278.0
  • Bit_score: 408
  • Evalue 4.80e-111
gsiD2; glutathione transport system permease GsiD similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 289.0
  • Bit_score: 367
  • Evalue 1.90e-99

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACCACCGCCGCGTCATCCGCCCGCCCTGCCTTGCGCGACCACCTTGTTGCCAGGGCCTTTCGCACGAAGACCGGCGCGATAGCCGGCGGATGGCTGGTGCTTCTCGCACTGGCGGCCATTTTTGCCCATGTGCTCACGCCCTACGAGTACGACGTCCAGCAACTGAGTGCCGCCTACAGCCCACCCAGCCTGTCGCATTGGCTGGGGACGGACGAATTCGGGCGCGATCTTCTCACCCGCATACTTTACGGCGCGCGGATCTCGCTTTCGGTTTCGGTCATCTCCATCGGCCTTTCGGTGTTGGCGGGGATGGTTCTGGGCGCAGCAGCCGGCTATTTCGGCGGACGTCTCGATCGCATGATTACAACCGTCATCGATTTGAGTTGGTCATTCCCGGAAATCCTCGTGGCGCTGATTCTGGTCGCAATCATCGGACCGGGGGTAACCGGCACGATGGTTGCCATAACCGTTGCCTATCTGGCGCAGTTCGCACGCCTGACGCGCGCGCAGGTCATGGCGATCAAGTCCGAGACATTCATCGAAGCGGCATCGGGTCTTGGCGCCTCGCATCGCCACATCCTGTTTCGACATCTCCTGCCAAACGCAATCACGCCGGTGCTGGTAAGTGGCATGCTGGCCACCGGAGACGCCATTATCCTGGAGGCGACGCTTGGGTTCTTCGGCCTTGGTGCGCAGCCGCCGACGCCGAGTTGGGGCGCGATGATGTCGTCAGGTACGGCCCTGTTGTTCAAGGCGCCATGGATCATCATCTTTCCGGGCCTTGCCGCAGCAATCACCGTCGTCAGCATCAACCTGTTCGGCGATGCGCTGATCGCCGGGCTCGATGTCCGCTCAAGGCCGAGAACCGAATGA
PROTEIN sequence
Length: 292
MTTAASSARPALRDHLVARAFRTKTGAIAGGWLVLLALAAIFAHVLTPYEYDVQQLSAAYSPPSLSHWLGTDEFGRDLLTRILYGARISLSVSVISIGLSVLAGMVLGAAAGYFGGRLDRMITTVIDLSWSFPEILVALILVAIIGPGVTGTMVAITVAYLAQFARLTRAQVMAIKSETFIEAASGLGASHRHILFRHLLPNAITPVLVSGMLATGDAIILEATLGFFGLGAQPPTPSWGAMMSSGTALLFKAPWIIIFPGLAAAITVVSINLFGDALIAGLDVRSRPRTE*