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SCN18_30_10_14_R5_P_scaffold_1009_14

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(14650..15711)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 370.0
  • Bit_score: 349
  • Evalue 5.50e-93
UPI0003D05203 related cluster n=1 Tax=unknown RepID=UPI0003D05203 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 365.0
  • Bit_score: 347
  • Evalue 1.50e-92
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 371.0
  • Bit_score: 345
  • Evalue 1.20e-92

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
CACATCACCGTGCGCACGCCGGTTTCGACCGCGCTTTATGTGCTGAACCACAAGCGCAGCACGCTCGTCGACCTCGAAAAGCGCTTCGGCGTGGTGATTACGCTCGAAACTGACGAGACTGTCGCGGCACAGCATTATGTGATCGCGCGCGGCGCGTTTGCCGAAAAGCCGGAAGGCTTTGTCGAAGCCCGTCCGCAGCCGGTCTATGTCGAACCGGAGGAACCGGAAGACGAGATCGTCGTCGAGGACGAAGCGGACGAGGAGAACGAACAGCCGCAGGCCGCGCAGCAGCAGGCGCGTTCGGGCGACGAAAATGGCGATAGCCAGCGTGACCGCAAGCGGCGTAGGCGGCGCAGGCGGCGCGGCGGCAGGGATCGCGAGCACGGCGAACGCGATCAGTCGAATGGAAATGCCGGCGACACAGAGGGTGCCTCCGCATCTGAACAGGCGGAAGAAACTTCCGGTGAGACCGAAGAAGCCACAACCGGCGCAGAGGTCGTAACTGCCGAGACCGCCGAAGCGGGCGAGGATGCGCAGGGCAAGAAGCGCCGGCGCGGCAAGCGCGGCGGCAAGCGCAACCGTCCTGAAAATGGCGAAGCGGAAGCCACCGCAGTTGCGGACGGCGAAGCAGCTACAAGCGAAGTTGCGGAGCCCGTGAGCGCTGCCGAAGCTGAGCCGGTGCAAGCTGTCGCGACCGTAGAAGCGGCTGACGAGGCGAAGGCTTCGGCAGAGCCGGAAGCGCCCGCCGCCGAGAAGCCGAAGAAGCCGCGCCGCACGACGAAGTCCAAGAAGGCCGTGGCCGCCGAAGCTGATGCAGCGGAAGCGGTGGTGGAACAGGCGCCTGCCGAGGAAGCTGTTGCGGAAAAGGCGGAGAGCGCCAAAGAGCCGGCGGCAAAGGCTCCGGCCAAGCCGCGCGCAACCCGCCGCAAGACGGCAGCAGCGGCGGCGGAGACGACCGCAAGCCCGGTGGTTTCCTCTGTCGTGGCCGATCAGCCAGCCGAACCCGCTGCGGATGACAAGCCGAAGCGCGGCGGATGGTGGCAGCGGAAGGGCTTTTTCTAA
PROTEIN sequence
Length: 354
HITVRTPVSTALYVLNHKRSTLVDLEKRFGVVITLETDETVAAQHYVIARGAFAEKPEGFVEARPQPVYVEPEEPEDEIVVEDEADEENEQPQAAQQQARSGDENGDSQRDRKRRRRRRRRGGRDREHGERDQSNGNAGDTEGASASEQAEETSGETEEATTGAEVVTAETAEAGEDAQGKKRRRGKRGGKRNRPENGEAEATAVADGEAATSEVAEPVSAAEAEPVQAVATVEAADEAKASAEPEAPAAEKPKKPRRTTKSKKAVAAEADAAEAVVEQAPAEEAVAEKAESAKEPAAKAPAKPRATRRKTAAAAAETTASPVVSSVVADQPAEPAADDKPKRGGWWQRKGFF*