ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1063_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 177..1004

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SFE1_RHIET similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 275.0
  • Bit_score: 422
  • Evalue 2.80e-115
amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 275.0
  • Bit_score: 422
  • Evalue 8.10e-116
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGS26051.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 275.0
  • Bit_score: 422
  • Evalue 4.00e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGCAAAAGAGGTTTTTCCTCAAAGCGCTGGTTGGTGCAGCGTTCCTTTTCGGTGCCACGGCCGGAGCCTATGCGCAGGATGCGCTGGCCCGCGTCAAGGAAGCCGGTGTCCTCAAGGTCGGCACCGAGACCGCCTTTGCGCCGTTCGACTTCATCGATGCCGGAACGCATGCGGGCCTGAACGTCGATCTGTACGACGAGATCGCCAAGGAGCTCGGCGTCAAGGTCGAATGGGTGCTGCTGCCATGGGAAGGCGTGCTGCCGGGTCTTGAAGCAGGCAAGTTCGACATCGTCGGCGGCCCTGCCACGATCACCAAGCAGCGCATGGAGCGCTACCGCTTCACGCCGCCGGTTGCGGAAGCCACCGTTGCGCTTTTGAAGCGCGCGGGCGATGAGACGGTGAAGAAGCCTGAAGATGTTGCCGGCAAGGTAGTCGGCGGCGGCAAGGCTTCGGCCCAGCTCGAACAGCTCAAGGCGTTTGTCGACACGCTGCCCGGCAAGGCGGATGTGCGCGAATATCCCGGCAACAACGAAGCCTATGCCGACCTTGCGGCCGGCCGCATCGTTGCCGTCGGCAATTCGCTGCCCAACATCGCCTTCGTCGCCAAGCAGCGCCCCGACACCTTCGAAGTGGTGCAGCCGCCGTTCGGCACCAAGGCCTATTTCGGCTATCCCGGCCTGAAGGACGACGACCACAAGAGCCTGATGGACGCGATCGAGGCCGCCATGCTCAAGATCAAGGGCGACGGCCGTCTCGGCACGATCCAGGAAAAGTGGTTCGGCGCCAAGTTCGAGACACCTGACCTGGTCAACGACCCGGCGCTCTGA
PROTEIN sequence
Length: 276
MQKRFFLKALVGAAFLFGATAGAYAQDALARVKEAGVLKVGTETAFAPFDFIDAGTHAGLNVDLYDEIAKELGVKVEWVLLPWEGVLPGLEAGKFDIVGGPATITKQRMERYRFTPPVAEATVALLKRAGDETVKKPEDVAGKVVGGGKASAQLEQLKAFVDTLPGKADVREYPGNNEAYADLAAGRIVAVGNSLPNIAFVAKQRPDTFEVVQPPFGTKAYFGYPGLKDDDHKSLMDAIEAAMLKIKGDGRLGTIQEKWFGAKFETPDLVNDPAL*