ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1436_8

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(8153..9466)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 437.0
  • Bit_score: 837
  • Evalue 8.30e-240
Ribosomal protein S12 methylthiotransferase n=2 Tax=Mesorhizobium RepID=V7GJX8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 437.0
  • Bit_score: 835
  • Evalue 1.30e-239
ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 437.0
  • Bit_score: 833
  • Evalue 1.40e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGTCCACCCCCCGCGTGAGCTTCGTCAGCCTCGGATGCCCAAAGGCACTCGTGGATTCCGAGCGCATCATCACCCGCCTGCGCGCCGAAGGCTACGAGATCGCCCGCAAACATGACGGCGCAGACCTCGTTGTCGTCAATACCTGCGGATTCCTCGATTCAGCGCGCGAAGAGTCGCTCGGCGCGATCGGCACGGCGCTCAAGGAAAACGGCAAGGTCATCGTTACCGGCTGCATGGGGGCGACGCCGGACCTGATCCGCGAAAAGCATCCCAACGTCTTGGCGATCACGGGCCCACAGGCTTACGAAAGCGTCATGGCTGCGGTGCATGAAGCGGCCCCGCCCGCGCATGATCCCTATGTCGATCTGCTGCCGCCGCAGGGCGTCAAGCTGACGCCGCGCCACTACGCCTATCTGAAGATTTCCGAGGGCTGCAACAACCGATGCACCTTCTGCATCATCCCGGCGCTGCGCGGCGATCTGGTCTCGCGCCCGGCCGCCGATGTGCTGCGCGAAGCCGAGAAGCTTGCCAAGGCAGGCGTGAAGGAAATCCTCGTCATCTCGCAAGACACCAGCGCGTACGGCGTCGACATCAAGTATCAGACAAGCGTCTGGCAGGACCGCGAAGTTCGCGCGAAATTCCTCGACCTCTCCGAGGAACTGGGCAAGCTCGGCGTTTGGGTGCGCATGCACTACGTCTACCCCTATCCGCACGTCGCCGACGTCATTCCGCTGATGGCGGACGGCAAGATCCTGCCCTATCTCGACATCCCATTCCAGCACGCCTCACCGCAAGTGTTGAAGAACATGCGCCGGCCAGCACATGGCGAAAAGACGCTGGACCGCATTCGCTCATGGCGCGAGGTTTGCCCGGACCTAGCGATCCGCTCCACCTTCATCGTCGGCTTCCCCGGCGAAACGGAGGAAGATTTCGAGATGCTGCTGGACTGGCTGGACGAGGCGAAGATCGATCGCGCCGGCTGCTTCAAGTATGAACCTGTCGGAGGCGCGCGCTCCAACGATCTCGGCCTCGAGCAAGTGCCACAGGAAATCAAGGAAGCGCGCTGGCATCGCTTCATGCAGCGGCAGCAGAAGATTTCCGCGGCTCAGTTGGCAAAGAAAGTCGGCAAGCGCCTGCCCGTCATCATCGATGAAGCGCATGGCAACGCGGGCAAGGGTCGCACCAAGTACGACGCGCCGGAAATCGACGGGTCGGTGCACATCCAGTCACGCCGGCCGCTGCGCACCGGCGACATCGTCACGGTGAAGATCGAGCGCAGCGACGCTTACGATCTTTACGGCACGGCCGTCTGA
PROTEIN sequence
Length: 438
MSTPRVSFVSLGCPKALVDSERIITRLRAEGYEIARKHDGADLVVVNTCGFLDSAREESLGAIGTALKENGKVIVTGCMGATPDLIREKHPNVLAITGPQAYESVMAAVHEAAPPAHDPYVDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPALRGDLVSRPAADVLREAEKLAKAGVKEILVISQDTSAYGVDIKYQTSVWQDREVRAKFLDLSEELGKLGVWVRMHYVYPYPHVADVIPLMADGKILPYLDIPFQHASPQVLKNMRRPAHGEKTLDRIRSWREVCPDLAIRSTFIVGFPGETEEDFEMLLDWLDEAKIDRAGCFKYEPVGGARSNDLGLEQVPQEIKEARWHRFMQRQQKISAAQLAKKVGKRLPVIIDEAHGNAGKGRTKYDAPEIDGSVHIQSRRPLRTGDIVTVKIERSDAYDLYGTAV*