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SCN18_30_10_14_R5_P_scaffold_2440_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1015..1815)

Top 3 Functional Annotations

Value Algorithm Source
Putrescine transporter subunit: membrane component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EN20_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 266.0
  • Bit_score: 485
  • Evalue 3.50e-134
Putrescine transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CCV05548.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 266.0
  • Bit_score: 485
  • Evalue 4.90e-134
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 266.0
  • Bit_score: 479
  • Evalue 3.10e-133

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGGCTAGGGGCTTCTCGATCAAGCACCAGCCCGGGTTCACCGCTATCGCGGCGACCTGCTTTGCCGTTCTCTACATGCCGATCATCGTTCTGGTGGCCTATGCCTTCAATGCGTCGAGTTCGACGTCCGAGTGGGGCGGGGTGTCGCTGAAATGGTTCCAGTCGGCGTGGAACAACGACCAGGTCGTGGACGCCACGTTGCGCTCTTTCCAGATTGCGGCCACCGCAGCCATTCTCGCCACCATCGTTGCCACCATGGCGGCACTGGCCACCACGCGCACGGCGCCCTATCCCGGCCTGACATTCAAGTATGCGGCCATCAACCAGCCGCTGATGGTGCCTGAAATCGTGACCGGCGTGGCGCTGTTGATCTTCTTTTCGCGCATCAAGATCTTTTCCGGCTATTCCGGCCTCGGCTACCTGATCGCGGCGCATACGGCTTTTTGTATCCCGTTTGCCTACCTGCCGATCCGGGCGCGGCTGGAGAACATGGACCTGACGCTGGAGCGGGCTGCGGCAGACCTTTACGCCACGCCGTTGAAAACATTCCGGCACGTGACCTTGCCGCTGTTGTGGCCCGGTATCCTTGCCGGGCTGATGCTGGCCTTCGTCATTTCGCTGGACGACGTCGTCATCACCGAATTCGTCAAGTCCGGCGGGCAGGACACGCTGCCAACCTACATGCTCGGCCAGATACGGCGAGGCATTACACCCGAAATCAACGCGATATCGACGGCGTTCCTGCTCTTGTCGATCGTTATCGTGACCCTGTTTTTCTTCATCAGCAGAAAACGCGACTGA
PROTEIN sequence
Length: 267
MARGFSIKHQPGFTAIAATCFAVLYMPIIVLVAYAFNASSSTSEWGGVSLKWFQSAWNNDQVVDATLRSFQIAATAAILATIVATMAALATTRTAPYPGLTFKYAAINQPLMVPEIVTGVALLIFFSRIKIFSGYSGLGYLIAAHTAFCIPFAYLPIRARLENMDLTLERAAADLYATPLKTFRHVTLPLLWPGILAGLMLAFVISLDDVVITEFVKSGGQDTLPTYMLGQIRRGITPEINAISTAFLLLSIVIVTLFFFISRKRD*