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SCN18_30_10_14_R5_P_scaffold_2440_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1808..2728)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine transporter subunit membrane component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFG0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 306.0
  • Bit_score: 540
  • Evalue 6.10e-151
Polyamine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCV05547.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 306.0
  • Bit_score: 540
  • Evalue 8.60e-151
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 306.0
  • Bit_score: 533
  • Evalue 2.10e-149

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGGCGAGCGCGGAGCAAGTCGCCACCCAAGCCGTACGGCGCGATATCCGCGACCGCTGGCTTCTTTCCGCGCCGGCCCTGCTTGTCATATTCTTTGCCGCGAGCGGTCCGCTTTTGATCGTGCTGGTCTATTCCTTCCTGACACCCGGTCCCTATGGCGACGTCCAATGGACGTTTTCGAAAGAAGCCTGGACGAGCGTGTTTCTGGAACGCGACATCTTCGACGACACGCTTTCGTTCGCCAGCGCCCACGTCACCATTTTCTGGCGTTCGCTCAAGCTCGCGCTGATGACGACGATCGCCACCTTGCTGATTGGTTTTCCGACTGCCTATTTCATTGCCACCCGAAGCGAGAAGTCGCGCGATCTCTGGCTGTTCCTGATCACCATTCCGTTCTGGACGAACCTGCTCATCCGCACTTTCGCGGTGCTGCAGATCATCCGCAACGAAGGCATCATCAATACGGCGCTCATCAAGATTGGCATCATCTCGGCGCCAATCCAGATACTCTACACCGACACGGCCATACTGATCGGCATGGCTTATGTTTATCTGCCGCTGATGGTGCTGCCGATCTACGCCAGCATGGAGAAGCTCGACTTCAGGCTGGTCGAGGCGGGCTACGATCTCTACGCGACGCGCTGGCAGGTGCTGCGGCGCATCATCTTCCCGCTGGTGAAGCCTGGCGTCATCGCCGGCTCCATACTGGTGTTCATCCCGGCCGTCGGTGCCTATGTGACGCCAAGCGTTCTCGGCGGCGGCAAGAACCTGATGCTGTCGAACCTGATCGAGCTGCAGTTCGGCCAGGGCCGCAACTGGCCGCTCGGCGCGGCCCTGTCGATCACCGTCATGGTGATCGTGATGGCGGCATTGCTGGTCTATGTGCGCAATACGGGCAGTTCGGAAACGCGCCATGGCTAG
PROTEIN sequence
Length: 307
VASAEQVATQAVRRDIRDRWLLSAPALLVIFFAASGPLLIVLVYSFLTPGPYGDVQWTFSKEAWTSVFLERDIFDDTLSFASAHVTIFWRSLKLALMTTIATLLIGFPTAYFIATRSEKSRDLWLFLITIPFWTNLLIRTFAVLQIIRNEGIINTALIKIGIISAPIQILYTDTAILIGMAYVYLPLMVLPIYASMEKLDFRLVEAGYDLYATRWQVLRRIIFPLVKPGVIAGSILVFIPAVGAYVTPSVLGGGKNLMLSNLIELQFGQGRNWPLGAALSITVMVIVMAALLVYVRNTGSSETRHG*