ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2456_8

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(5410..6111)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF333B related cluster n=1 Tax=unknown RepID=UPI0003CF333B similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 211.0
  • Bit_score: 302
  • Evalue 2.10e-79
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX37630.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 216.0
  • Bit_score: 303
  • Evalue 1.80e-79
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 211.0
  • Bit_score: 300
  • Evalue 3.90e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGTTGCGAGCGCGACTGGAGAAGACGGCTGAACACGGTGCGGTTTCGACCGCCGCCGACGAAACCCGCGCAGCGCTCATCCAGGCAGCATTGAAGCTGTTCGGACGGCAAGGCTTCGAGGGCACCTCGACGCGCGAGATCGCGGCGATGGCCAAGGCCAATATAGGCTCCATTGCCTATCATTTCGGCGGCAAGGAAGGCCTGCACGCGGCGACCGCCGACCATATCGTCGAGACGATCCAGAAGATCGCGGCCCAGACCCTTGGCAATGTGCACACCGCCGCGAACAGCCCGCCGGATGCGCAGGTCGCCCAGGCGCAGATGTTCGCGACGCTGGAGCGCATGGTCGGCTTTTTCGTGGTGAGCTCGGAGGCCGGCGACATCGCCCGCTTCATGCTGCGCGAAACCTCGCAACCTACCAATGCGCTTGATCGTATCTATCACGGCGTGTTCGAGCCGTTGCACAAGCGGCTTTGCCAGATCTGGGAACAGGCGACCGGCGAACCGGCGGAAAGCGAGCGCACGAGGCTCACGGTTTTCACGCTGATCGGCCAAGTGGTCTATTTCCGTATCGGCCGCGAAGTGGTTTTGAAACGAATGGGCTGGGACGGCATCGGCGACAAGGAGGCCGGTCAGGTGCTTGGCGCGATAAGCGTAAATCTCAGCGCCCTGCTGGCGGCGCGAAAGGATGCGAATAGATGA
PROTEIN sequence
Length: 234
MLRARLEKTAEHGAVSTAADETRAALIQAALKLFGRQGFEGTSTREIAAMAKANIGSIAYHFGGKEGLHAATADHIVETIQKIAAQTLGNVHTAANSPPDAQVAQAQMFATLERMVGFFVVSSEAGDIARFMLRETSQPTNALDRIYHGVFEPLHKRLCQIWEQATGEPAESERTRLTVFTLIGQVVYFRIGREVVLKRMGWDGIGDKEAGQVLGAISVNLSALLAARKDANR*