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SCN18_30_10_14_R5_P_scaffold_2521_9

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(5845..6042)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: elongation factor Tu, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A0A7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 65.0
  • Bit_score: 129
  • Evalue 1.20e-27
tuf; elongation factor Tu similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 65.0
  • Bit_score: 128
  • Evalue 4.40e-28
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 65.0
  • Bit_score: 128
  • Evalue 2.20e-27

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
CAGTTCTACTTCCGCACGACGGACGTGACCGGCATTGTGACGCTTCCGGAAGGCACCGAGATGGTGATGCCGGGCGACAACATCACGGTTGATGTCGAACTGATCGTGCCGATCGCCATGGAAGAGAAGCTGCGCTTCGCTATCCGCGAAGGCGGCCGCACCGTGGGCGCCGGCATCGTCGCTTCGATCGTAGAATAA
PROTEIN sequence
Length: 66
QFYFRTTDVTGIVTLPEGTEMVMPGDNITVDVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE*