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SCN18_30_10_14_R5_P_scaffold_1869_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(5278..6684)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E289B similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 436.0
  • Bit_score: 476
  • Evalue 1.70e-131
O-antigen polymerase {ECO:0000313|EMBL:EPE94968.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 419.0
  • Bit_score: 464
  • Evalue 1.60e-127
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 427.0
  • Bit_score: 369
  • Evalue 8.10e-100

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGAGCAGATCGTCACCCGCGCTGACCAATACAGGGAGAGCCAGCAGGCAATTGGGCGCACAGTCCGAGCCAGGCCCGGCCTCGCCACGCGCGCGCGGCAATCGCTCCGGCCAAAGAACGCGCTCCTCATCCCAAAAGCTGGCCTTGCCGGTCTCGCTGTTTCTTGTCGCGCTGTTCATTCCATGGATTTTCAAGGTCGGATCACTGGCTCTTTCGCCATATCGGCTTGTGCTGGTCGCGACCTTCATCCCATGCCTGCTCGCCTGGCTGTCAGGCAAGGCCGGGCGCATCCGCGCCGCCGATATCCTGCTTTTCCTCTATTGCGCCTGGGCAACCGTCAGCCTTATCGCGAACCACGGCGTCGGTGCCTCATTCCAGACCGCGGGCATATTGCTGATTGAGACGGTCGGGCCATACCTGATGGCGCGCTGCTATATTCGCAATGTCGGAACATTCCGCGAGATGATCCGCCTGCTGTTCCTCATGGTGGCAATATTGCTACCCTTCGCGATTTTGGAAGCCATCGCCAACCGCGACGTCATCATGGACCTGTTTTCAACGGTCCTGCCAACGCACGTCATCGCAATCACCGAGCCGAGATGGGGTTTGAGGCGCGTTCAAACAGTATTTGAACACCCGATCCTGCATGGCGTTGTCTGCGGCAGCATACTTGCGTTGGTCTTTGCCGTGCTCGGCGACCGCAAATCGACATCGAAAAAATGGCTGATGACGGGCGTCGTCGCGGTCACCACGTTCCTGTGCTTCTCCTCGGGCCCGCTGACGGCGATTGCCGCACAAGGCATGCTGCTTTGCTGGAACTGGTTTCTCCGCGACAACAAGAACCGATGGAAACTCCTGTGGGCCATGGTCTTTGCCGCCTACGTCTTTGTCTCCATGGCTTCCAATCAAACGGTGCCTGAGTTCTTCATCACCCATTTCGCGTTCGACCAGTTGTCGGCCGGCTATCGCGTCCTGATCTGGAATTTCGGCACCGAGTCGGTCATGAACCACCCCATCTTCGGCGTAGGGCTGGGTGAATGGGACCGGCCGTCCTGGATGCCGCCGAGCATCGACATGTTCTGGCTCATCCATGCCGTCTACTACGGCTTGCCGGGCGGCATCCTGATGATGGCGGCCTTCCTGTCCAATGCCTTCAGCGTCGGATATGCGAAGGGTCTTGACGAAGAGACCGGTCGATACAAGACAGCCTACGTGATCGCTCTGACCGGCCTGTTCATGGTTGGATGGACCGTCCATTTCTGGAATACGACCTATGTGCTGGTCATGTTCCTGATGGGCGCAGGGACCTTCTTTCTGGATACCGCGACAGAGCAGGATGCGCCCCGTTCCGGACGCCGGGCGTCAGGTCAAGCAAGCGACCCGGGTCGCGCTCGCAGGCGCACGTGA
PROTEIN sequence
Length: 469
MSRSSPALTNTGRASRQLGAQSEPGPASPRARGNRSGQRTRSSSQKLALPVSLFLVALFIPWIFKVGSLALSPYRLVLVATFIPCLLAWLSGKAGRIRAADILLFLYCAWATVSLIANHGVGASFQTAGILLIETVGPYLMARCYIRNVGTFREMIRLLFLMVAILLPFAILEAIANRDVIMDLFSTVLPTHVIAITEPRWGLRRVQTVFEHPILHGVVCGSILALVFAVLGDRKSTSKKWLMTGVVAVTTFLCFSSGPLTAIAAQGMLLCWNWFLRDNKNRWKLLWAMVFAAYVFVSMASNQTVPEFFITHFAFDQLSAGYRVLIWNFGTESVMNHPIFGVGLGEWDRPSWMPPSIDMFWLIHAVYYGLPGGILMMAAFLSNAFSVGYAKGLDEETGRYKTAYVIALTGLFMVGWTVHFWNTTYVLVMFLMGAGTFFLDTATEQDAPRSGRRASGQASDPGRARRRT*