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SCN18_30_10_14_R5_P_scaffold_1930_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3588..4469

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 293.0
  • Bit_score: 523
  • Evalue 1.00e-145
dihydrodipicolinate synthase (EC:4.2.1.52) similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 293.0
  • Bit_score: 521
  • Evalue 1.00e-145
dihydrodipicolinate synthase n=1 Tax=Rhizobium loti RepID=UPI000362ABCE similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 293.0
  • Bit_score: 525
  • Evalue 3.30e-146

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCTGAGAGGCTCGCTTACCGCGCTCGTGACACCGTTCGACAAGGACGGACGTTTCGACGAGAAAGCCTTTCGGGCATTGGTCGAATGGCAGATCGCGGAAGGCACGACCGGGCTCGTTCCGGTGGGCACGACCGGTGAATCGCCGACGCTGTCGCATGACGAGCACCGCCACGTGGTGAAGGTGTGCGTGGAAGTGGCCAAGGGAAGGGTGCCCGTGGTTGCCGGTGCCGGCTCCAACAACACGCAGGAAGCGATCGGGCTGGCGAAGTATGCCGAAAGCGTCGGCGCGGCGGCCGCACTTGTGGTGACGCCCTATTACAACAAGCCGACGCAACGCGGTCTCTACGAGCACTTCGCCGCCGTGGCGCGGGCGACCTCGCTGCCGATCGTCATCTACAACATCCCGCCGCGCTCGGTCATCGACATGAGCCCGGAGACGATGGGCCGCCTCGCCAACGACTTCAAGAACATCGTCGGCGTGAAGGACGCGACCGGCAAGATCGAGCGCGTTTCCGAACAGCGCGCGACCTGTGGCAAGGACTTCATGCAGCTTTCGGGCGAGGATGCTTCGGCGCTCGGCTTCAACGCGCATGGCGGCATCGGCTGCATTTCGGTGACGTCCAATGTTGCGCCGCGCCTGTGCGCGGAGTTCCAGGAGGCCTCGCTCTCCGGCAATTCGGCCAAGGCGCTGGAATTGCAGGACAGGTTGTTGCCGCTGCACAAGGCGATCTTCCTCGATCCGGGTGTGGCCGGTGCGAAATACGGGCTTTCGCGGCTGGGCAAGATCGAAAATGTCGTGCGCCTGCCGCTGGTCACCGCCGAGAACTCGACGGAGCAGAAGATCGAAGCGGCGATGAAGCATGCCGGCTTGATAAACTAG
PROTEIN sequence
Length: 294
MLRGSLTALVTPFDKDGRFDEKAFRALVEWQIAEGTTGLVPVGTTGESPTLSHDEHRHVVKVCVEVAKGRVPVVAGAGSNNTQEAIGLAKYAESVGAAAALVVTPYYNKPTQRGLYEHFAAVARATSLPIVIYNIPPRSVIDMSPETMGRLANDFKNIVGVKDATGKIERVSEQRATCGKDFMQLSGEDASALGFNAHGGIGCISVTSNVAPRLCAEFQEASLSGNSAKALELQDRLLPLHKAIFLDPGVAGAKYGLSRLGKIENVVRLPLVTAENSTEQKIEAAMKHAGLIN*