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SCN18_30_10_14_R5_P_scaffold_1947_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(6151..6690)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEF005 related cluster n=1 Tax=unknown RepID=UPI0003CEF005 similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 179.0
  • Bit_score: 281
  • Evalue 5.10e-73
Membrane protein {ECO:0000313|EMBL:EZQ14364.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 181.0
  • Bit_score: 298
  • Evalue 5.70e-78
outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 179.0
  • Bit_score: 280
  • Evalue 1.90e-73

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCACATTTGAGAACCGGCCTGATTGCTGCATTCGGAGCCGTGTTGCTGGCGAGCGGATGCTCAAGCACACGTTTCTCCTCCATGGATTCGGCCCAGCCCGAGCCGTTGCAGGCTTCTCCGTCGGGCACCGTTTCATCCAGCCAGTTGCCGCCTCCGGCAACGCCTGCGCCGACCGATCCTTCGCAGTTCCCGGCGGCTCCACAGGGTACGCAAGTGGCCGCGCTGCCTACCGATGGAAGCGCGCCCGCGGGTGCGGCGGACCTGACGGCCTCAAGTGTCGCAGGCGTGTGGACGGCCAATGTCGCCGGCCAAAGCTGCAAGGTCGCAACGCCGCAAACGAAGTTCGGCCAGGGATACCGCGCCGGACCATCGCGTTGCCCGGCACCCGTCGATGGCGTGAAGTCGTGGAACGTGGCCGGCAAGCAGCTCACCCTCTACGATCAGGACGGTGGCACGCTCGCTCGCCTTTATTCCTCGGGAGCCGGCAAATTCGACGGCCAGACTTCCAATGGGCAAGCCATTTCGCTAACACGCTAA
PROTEIN sequence
Length: 180
MAHLRTGLIAAFGAVLLASGCSSTRFSSMDSAQPEPLQASPSGTVSSSQLPPPATPAPTDPSQFPAAPQGTQVAALPTDGSAPAGAADLTASSVAGVWTANVAGQSCKVATPQTKFGQGYRAGPSRCPAPVDGVKSWNVAGKQLTLYDQDGGTLARLYSSGAGKFDGQTSNGQAISLTR*