ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2349_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..305)

Top 3 Functional Annotations

Value Algorithm Source
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KBY2_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 101.0
  • Bit_score: 189
  • Evalue 8.70e-46
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 101.0
  • Bit_score: 189
  • Evalue 2.50e-46
3-beta-hydroxy-delta(5)-steroid dehydrogenase {ECO:0000313|EMBL:ESZ25788.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 101.0
  • Bit_score: 189
  • Evalue 1.20e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGACCGAAATCCTGCAAACCCCAAAGCTCGTGGTGATTTTCGGCGGCGCGGGCTTTGTCGGACGTCATGTCGTGCGGGCTCTTGCCCAGCGAGGCTACCGCATCCGCGTCGCGTGCCGCCGGCCCGATCTGGCAGGCCATCTCCAGCCGCTCGGCAATGTCGGCCAAATCCAGCCGGTGCAGGCGAATTTGCGCGTGCGCTGGTCGGTCGATCAGGCGGTGATCGGCGCCGACCACGTCATCAACCTTGTCGGCATCCTGCACGAGAGCGGTCGCCAGAAGTTCCGCACCGTCCATGAATTC
PROTEIN sequence
Length: 101
MTEILQTPKLVVIFGGAGFVGRHVVRALAQRGYRIRVACRRPDLAGHLQPLGNVGQIQPVQANLRVRWSVDQAVIGADHVINLVGILHESGRQKFRTVHEF