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SCN18_30_10_14_R5_P_scaffold_1484_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2273..3169

Top 3 Functional Annotations

Value Algorithm Source
RpiR family transcriptional regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R1B9_RALPI similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 278.0
  • Bit_score: 243
  • Evalue 2.00e-61
RpiR family transcriptional regulator {ECO:0000313|EMBL:KFE35260.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 286.0
  • Bit_score: 270
  • Evalue 2.10e-69
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 278.0
  • Bit_score: 243
  • Evalue 5.60e-62

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAATAACACATCAGGGGAGGTCGGCCCTTCGATCGAGGCAAGGATCCTCGAAGTTCTGGATAGCCTTACGGGGAGCGAGCGCCGTTTGGCGGATGTGATTTTGGAAGAGGTTGCGAATCTGTCGAGCTTCACGGCAAGCGAGCTCGCCGAACGGGCCGGAGTTTCAAACGCCACCGCAGCCCGGTTTTTCCAGCGACTCGGCTATGACAGCTTCGCGGATATGCGGCGCAAGGTCCGTCAGGTGCAGGACTGGGGCTCGCCGCTCTATGAGCTGACTGGGATCGGCGAGCGCCGCTTGGCGTCGGGCGATTTTGGCCTTCATGTTGCGCTCGACCTGCAAAATCTGACCCGCACTGCCGAATTGCTCTCTCCGGGCGATCTTGAGGTGGCAGTCAAGGCTCTGGTGCAGGCAAGAACCGTCTGGGTCGTGGGATTCCGCAATTCCTACGCGCTGGCGACGTATGCGCGCGCCCTCCTCAACAATCTAAGGCCATCGGTTAACCTTCTGCCCATTGCAGGCATGACCATGAGCGAGGAACTTGCAAGCCTCGGCCCGCAGGATGCGATGCTTGTACTTGGGTTCCGGCGCCGACCTCTGCTCCTTCGCGAAATCATGCAGGCAGGAAAGGACCGTGGCGTCCAGATGGTTCTGGTGGCCGATCTTACGGCCGCCAGGACCGCCAGCTTGGCTACGGTGACGCTGCGCTGCCATAATCGAGGTCATAGCTTCTTCGACAGCTATGCTGCGCCAATCAGCGTGATCAACTATCTGTGCGCCGCCGTCGGGCTGGGGTTGGGTGACAGCGCGGTGGCGCGCCTGGAGCAAATCGAAACGCTGCATGAGAAGTTCGACCCGCTGGTCGTCCCATCAATGCGCAGGCGAGGGCGAAAATAG
PROTEIN sequence
Length: 299
MNNTSGEVGPSIEARILEVLDSLTGSERRLADVILEEVANLSSFTASELAERAGVSNATAARFFQRLGYDSFADMRRKVRQVQDWGSPLYELTGIGERRLASGDFGLHVALDLQNLTRTAELLSPGDLEVAVKALVQARTVWVVGFRNSYALATYARALLNNLRPSVNLLPIAGMTMSEELASLGPQDAMLVLGFRRRPLLLREIMQAGKDRGVQMVLVADLTAARTASLATVTLRCHNRGHSFFDSYAAPISVINYLCAAVGLGLGDSAVARLEQIETLHEKFDPLVVPSMRRRGRK*