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SCN18_30_10_14_R5_P_scaffold_1364_7

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(6573..7301)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 232.0
  • Bit_score: 426
  • Evalue 1.40e-116
UPI0003CF53C5 related cluster n=1 Tax=unknown RepID=UPI0003CF53C5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 232.0
  • Bit_score: 427
  • Evalue 7.80e-117
ribosomal RNA methyltransferase RrmJ/FtsJ similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 232.0
  • Bit_score: 425
  • Evalue 8.40e-117

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGACCAAGAAACCTGCCAAGCCGGGTGCCGGAGGAATGCGCGTATTGCGCACCCGCATCAAGAAAAAGAGCGGGCTTAAGGAATCGTCGCGCCGTTGGCTGGAACGCCACATGAACGATCCTTACGTGCAACGCTCCAAGGCGGATGGTTATCGCTCGCGGGCCGCCTACAAGCTGATCGAGATCGACGACAAGCATCATCTGTTGAAGCCGGGCATGCGCGTGATCGATCTTGGCGCGGCGCCCGGAGGTTGGTGCCAGGTGGCGGCAGTGCGCACCAAATCGACGGCCGAAGCGCCGCACGTGGTCGGTATCGACTACCTCGAAATGGCTGCCGTGCCGGGTGCCGAAGTCCTTTTGATGGATTTCCTCGACCCTGAAGCGCCTGCCAGGCTGGCCGAGGCGCTGGGCGGCGATCCGGACATCGTGTTGTCGGACATGGCAGCGCCGACCACGGGGCACCGCCGCACCGACCATATCCGGACCATGCACCTGTGCGAAGTTGCAGCCGATTTTGCCATGTCGGTGTTGCGGCCGGGCGGGCATTTCCTGGCCAAGACGTTCCAGGGCGGCACTGAAGGCGGACTGCTTGACGCGCTGAAGCGCAACTTCAAGTCTGTCCATCACGTCAAGCCGCCGGCTTCGCGCGACGAGTCCGTCGAGCTCTATCTGCTGGCCAAGGATTTCAAGGGCAGGGCTGATGTCGACGACGACAGGGACGCTCCGTAG
PROTEIN sequence
Length: 243
MTKKPAKPGAGGMRVLRTRIKKKSGLKESSRRWLERHMNDPYVQRSKADGYRSRAAYKLIEIDDKHHLLKPGMRVIDLGAAPGGWCQVAAVRTKSTAEAPHVVGIDYLEMAAVPGAEVLLMDFLDPEAPARLAEALGGDPDIVLSDMAAPTTGHRRTDHIRTMHLCEVAADFAMSVLRPGGHFLAKTFQGGTEGGLLDALKRNFKSVHHVKPPASRDESVELYLLAKDFKGRADVDDDRDAP*