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SCN18_30_10_14_R5_P_scaffold_3829_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3157..4026)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF5AD9 related cluster n=1 Tax=unknown RepID=UPI0003CF5AD9 similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 284.0
  • Bit_score: 520
  • Evalue 6.20e-145
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 284.0
  • Bit_score: 520
  • Evalue 8.70e-145
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 292.0
  • Bit_score: 513
  • Evalue 3.60e-143

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ACAATGAACATGCAACCCGAACCGATCGCCGACACGGAAAGCGGATATCATCCGCTGTTCAGGGATGCGCCGTCTTCGGTGGAGTTCAACAAGCTGCGCAAGCGCGTGTTGCGGCTGACCCGGCAGGCCATCGAGGATTTCGCCATGGTCAAGCCCGGCGAGCGCTGGCTGGTGGCGCTGTCGGGCGGCAAGGATTCCTACGGGCTGCTCGCCATCCTGCTCGATCTCAAATGGCGCGGGCTTTTGCCGGTCGAGCTGTTGGCCTGCAATCTCGACCAGGGCCAGCCGAACTTTCCCAAGCACATATTGCCGGATTATCTCAACGCCAACGGCATCGCCCACCGTATCGAGTACCAGGATACCTATTCGATCGTGACCGACAAGCTGGCCGAAAACAGCACCTATTGCTCGCTGTGTTCACGGCTGAGGCGCGGTCATCTCTATCGCATTGCCCGCGAGGAAGGGTGCTCGGCGCTGGTGCTGGGACATCACCGCGAGGACATACTCGAAACCTTCTTCATGAACCTGTTCCACGGCGGCCGCCTTGCCGCCATGCCGCCGAAACTGTTGAACGACGACGGCGACGTGATGGTGCTGCGGCCATTGTCCTACTGCGCGGAAAACGATCTGGAACGGTTTGCCTCGGGCATGCAGTTCCCGATCATCCCGTGCGACCTGTGCGGCAGTCAGGACGGGCTTCAGCGCAACATCATGAAGGCAATGCTCGAAGACATCGAAAAGAAGATGCCGGGGCGCAAGGACACGATGATCCGGGCGCTGACCAATGTGCGCCCGTCACACCTGCTCGACCGCAAGCTGTTCGACTTTGCCGGACTGACGCTAAGCTCGGGTTCTGCCGGTTCGGAGTGA
PROTEIN sequence
Length: 290
TMNMQPEPIADTESGYHPLFRDAPSSVEFNKLRKRVLRLTRQAIEDFAMVKPGERWLVALSGGKDSYGLLAILLDLKWRGLLPVELLACNLDQGQPNFPKHILPDYLNANGIAHRIEYQDTYSIVTDKLAENSTYCSLCSRLRRGHLYRIAREEGCSALVLGHHREDILETFFMNLFHGGRLAAMPPKLLNDDGDVMVLRPLSYCAENDLERFASGMQFPIIPCDLCGSQDGLQRNIMKAMLEDIEKKMPGRKDTMIRALTNVRPSHLLDRKLFDFAGLTLSSGSAGSE*