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SCN18_30_10_14_R5_P_scaffold_5129_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1107..2486)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE2BDC related cluster n=1 Tax=unknown RepID=UPI0003CE2BDC similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 461.0
  • Bit_score: 671
  • Evalue 5.90e-190
Transporter {ECO:0000313|EMBL:EZQ12808.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 460.0
  • Bit_score: 713
  • Evalue 1.90e-202
type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 461.0
  • Bit_score: 669
  • Evalue 6.30e-190

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
GTGCCGTCCTTTAGCAAGACCATTTTTGCTGCCGTGCTTGTCTCTGCAACCGCGCTTTCGTCATTGTCGGTTTCGGCGGAGACCATCACCGGTGCTTTGTCGAAGGCTTACCAGAACAATTCGCAGTTGAACTCGGCTCGCGCCGGCGTTCGCGTCGTCGATGAGGACGTGGCTATTGCCAAGTCCGGATGGCGGCCGACGGTTGGTGCCTCCGCAAGCATCGACTACACCAATACACGCCGCGATACTGGCACTTCGCGCCTGACCACCGGCAGCTACGGTGTGCAGATCAACCAGATGCTGTTCGACGGTTTCCAGACCAAGAACAACGTGGCTGCTGCCGAGGCCCGCGTTCGCGCTTCGCAGGAAAGCCTGCGCAATACGGAAGAGAACATTCTCTTCAGCGCCGCGCAGGCCTACATGAACGTGATCCACGACCGTCAGGTTGCGTCACTGACCCAGCAGAACCTGCAATTCCTCAACGAGCAGGCACGCGCCGCTCGCTCGCGCTTCGATGTCGGCGAGGGTACCCGCACGGACGTAGCGCAGGCCGATGCCGCCCGCTCTGGCGCAGAGGCACAGGTGAGCGCTGCCCGCGCTCAGGCTCTTGCGAGCGCAGCGATCTATCATCAACTTGTCGGCGAAGAACCCGGCAAGCTGAAGGCGGCCTCGCCGCTGGGCAAGCAGATCCCTTCGAGCTTGGATTCAGCGGTATCTGTTGCTTCCGCAGAACATCCGGCAATCCTGGCCACGGGCCACCTGGTTGATGCAGCGGCCTTCTCGGTCAAATCCGCGGAAGGCGCGCTGCTGCCGACGGTAACAGCTTCAGCGGGTATTTCGCAGACCCACGTCAGTTCGTCCGGGGCGTCCACCTTGTCGACGGGCGAGACGACTTCAGCCAATATCGGCGCCACTTTGAACATCCCGATCTATCAGGGCGGCCGCACGTCGGCACAGGTGCGCAAGTCCAAGGAATCGCTAAGCCAGGCTCGCATCGAGGTTGATGTCAGTCGCGATCAGGTGCGTCAGGCGGTAACCGCCGCATGGACCTCCTATGCCGCGGCAAAGGAGGGCGTTGTCGCCAACCGCGCACTGGTCAACGCTGCACAACTGGCTCTGAACGGCGTGGTTGAGGAACGGAATGTCGGCCAGCGCACCACGCTCGATGTGCTGAACGCACAGGCTGACGTGATCAGCGCCAAGATCAATCTGGCCGGATCCGAGCGGGACGTGGTGCTGGCAAGCTATGCGATCCTGCAGGCGATGGGCCGGTTGTCGGTCGAACGGCTGGGATTGCAGGTCACGAAGTACCAGCCACAGGAACACTACGAGGCGGTCAAGGACAAGTGGTTCGGCCTTCGCACGCCTGATGGTCGTTAA
PROTEIN sequence
Length: 460
VPSFSKTIFAAVLVSATALSSLSVSAETITGALSKAYQNNSQLNSARAGVRVVDEDVAIAKSGWRPTVGASASIDYTNTRRDTGTSRLTTGSYGVQINQMLFDGFQTKNNVAAAEARVRASQESLRNTEENILFSAAQAYMNVIHDRQVASLTQQNLQFLNEQARAARSRFDVGEGTRTDVAQADAARSGAEAQVSAARAQALASAAIYHQLVGEEPGKLKAASPLGKQIPSSLDSAVSVASAEHPAILATGHLVDAAAFSVKSAEGALLPTVTASAGISQTHVSSSGASTLSTGETTSANIGATLNIPIYQGGRTSAQVRKSKESLSQARIEVDVSRDQVRQAVTAAWTSYAAAKEGVVANRALVNAAQLALNGVVEERNVGQRTTLDVLNAQADVISAKINLAGSERDVVLASYAILQAMGRLSVERLGLQVTKYQPQEHYEAVKDKWFGLRTPDGR*