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SCN18_30_10_14_R5_P_scaffold_2555_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..986)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 328.0
  • Bit_score: 627
  • Evalue 5.70e-177
PREDICTED: uncharacterized protein LOC102324430 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AF5B similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 328.0
  • Bit_score: 633
  • Evalue 7.40e-179
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 325.0
  • Bit_score: 627
  • Evalue 1.50e-177

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGCAGGAAATGAAACTCGCAGAGTTCAAGAACAAGAAGCCCCCGGAGCTGATCGCTTACGCCGAATCGCTCGAGGTGGAAAACGCCAGCGTCATGCGCAAGCAGGAGCTGATGTTTGCCATCCTGAAGAAGCTGGCCGCGCAAGACATCGAGATAATCGGTGACGGCGTGGTCGAAGTGCTGCAGGACGGGTTCGGGTTCTTGCGCTCAGCCAACGCCAACTATCTGCCGGGTCCCGACGATATCTACATTTCCCCCTCGCAGATCCGGCGCTTTTCGCTGAAGACGGGCGATACGGTCGAAGGGCCAATTCGCAGTCCGAAAGAGGGCGAGCGCTATTTTGCTCTGCTGAAGGTCAACACGATCAATTTCGACGATCCGGAAAAGATCCGCCACAAGATCCATTTCGACAATTTGACGCCGCTCTATCCGACCTCGCGGTTGAAGATGGAGATGGAGCATCCGACCTCGAAGGACATTTCGCCGCGCGTCATCGATCTGGTGGCCCCGCTCGGCAAAGGCCAGCGTGCCCTGATCGTGGCGCAACCGCGCACCGGCAAGACGGTGCTGTTGCAGAACATTGCCCACTCCATTACCACCAATCACCCCGAGTGCTATCTGATCGTGCTTCTGATCGACGAGCGCCCGGAAGAAGTTACCGACATGCAGCGTTCGGTGAAGGGCGAGGTGGTTTCCTCGACCTTCGACGAACCGGCAGCGCGTCACGTTCAGGTCGCTGAAATGGTGATCGAGAAGGCCAAGCGACTGGTCGAACACGGTCGCGATGTCGTCATCCTGCTCGATTCGATCACCCGTTTGGGCCGCGCCTACAACACCGTCGTTCCGTCATCCGGCAAGGTCTTGACCGGCGGCGTCGACGCCAATGCGCTCCAGCGCCCGAAGCGGTTCTTCGGTGCAGCCCGCAATATAGAGGAAGGCGGGTCGTTGACTATCATTGCCACTGCGCTGATCGACACCGGCAGC
PROTEIN sequence
Length: 328
MQEMKLAEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDIEIIGDGVVEVLQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTINFDDPEKIRHKIHFDNLTPLYPTSRLKMEMEHPTSKDISPRVIDLVAPLGKGQRALIVAQPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAARHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGS