ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2555_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1674..2699)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 341.0
  • Bit_score: 572
  • Evalue 3.90e-160
UPI0003CE7A58 related cluster n=1 Tax=unknown RepID=UPI0003CE7A58 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 341.0
  • Bit_score: 572
  • Evalue 2.80e-160
uroporphyrinogen decarboxylase similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 341.0
  • Bit_score: 561
  • Evalue 1.40e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGAGCGTGAAGCGGATTGTAGTCGACGTGTTGAATGGCGAGGCTGCCTATCCGCCACCGCTATGGATGATGCGCCAGGCAGGACGTTATCTGCCGGAGTACCGTGAGACGCGTAAGAAAGCGGGGTCCTTCCTCGATCTTTGCTATGATCCAGACAAAGCGGTCGAGGTGACCTTGCAGCCGATCGAGCGCTTTGGCTTTGATGCCTCGATCCTGTTTTCCGATATCCTGGTGGTTCCGCATGCTCTCGGCCGAGACCTTCGCTTCGAGGAAGGGCATGGACCGTTGATGACGCCAATTACGGCTGCCGGAATTGCCGAGCTCAATCCTGAAACGTTTCACGTGAATCTGGCACCGGTCTACGAGACGGTGCGGCGTTTGCGCAAACAGTTGCCATCTGAAACGACGTTGATCGGCTTCTGCGGTGCGCCGTGGACGGTCGCGACCTACATGATCGCTGGACGCGGTACGCCCGACCAGGCGCCGGCAAGGCTGTTTTCCTACCGTGAACCCGAAGCGTTTCGTCACCTGCTGAAGGTTCTGGCTGATCAATCGGCTGCCTATCTGATCAGGCAGATCGAGGCGGGGGCGGATGTCGTGCAGATTTTCGATTCATGGTCGGGCGTGCTCGACGATGCGTCATTCGAAGCTTTCTGCGTCAAGCCGGTCGCCGAGATCGTCCGGCAGGTGAGGTCGGTACATCCCACTGTTCCGATCATCGGTTTTCCGAAGGGTGCCGGCATCAACAATGCAACCTATCGGAAAAAGACGGGCGTCACGGCACTTGGGCTGGATTGGACGGTGCCATTGTCCGAAGTCAAGGCGATGCAGCGTGACGGGGCCGTGCAGGGCAATCTGGACCCCTTGAGGCTGGTTGCCGGCGGGCAGGCGCTGGCGGAAGGTGTCGGCAATATCCTGAAAGCCGTGCGGGGTGGGCCATTCGTGTTCAATCTTGGCCACGGCATCGTGCCTGAAACCCCCATCGAACATGTCTGGGCGATGATCAATCAAGTCAGGAATGGGTGA
PROTEIN sequence
Length: 342
MSVKRIVVDVLNGEAAYPPPLWMMRQAGRYLPEYRETRKKAGSFLDLCYDPDKAVEVTLQPIERFGFDASILFSDILVVPHALGRDLRFEEGHGPLMTPITAAGIAELNPETFHVNLAPVYETVRRLRKQLPSETTLIGFCGAPWTVATYMIAGRGTPDQAPARLFSYREPEAFRHLLKVLADQSAAYLIRQIEAGADVVQIFDSWSGVLDDASFEAFCVKPVAEIVRQVRSVHPTVPIIGFPKGAGINNATYRKKTGVTALGLDWTVPLSEVKAMQRDGAVQGNLDPLRLVAGGQALAEGVGNILKAVRGGPFVFNLGHGIVPETPIEHVWAMINQVRNG*