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SCN18_30_10_14_R5_P_scaffold_4050_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3215..3784)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMU1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 179.0
  • Bit_score: 290
  • Evalue 8.90e-76
ABC transporter {ECO:0000313|EMBL:EHK57963.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 179.0
  • Bit_score: 290
  • Evalue 1.20e-75
ATPase component of various ABC-type transport systems with duplicated ATPase domain similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 174.0
  • Bit_score: 277
  • Evalue 1.70e-72

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GATTTGCAGATGATCTTTCAGGACCCGATGTCCTCGCTCAATCCGCGCCGGACCATCGGCGCCATCATCGCCGCGCCGTTGAAGCACAACGGCCTTACCAATGTCGGCGCACGCGTTGCCGAGGCGCTGGAGCGCGTCGGCCTGCCGCCGGCCTTCGCCACCCGCTACCGCCATGAGCTGTCCGGCGGTCAGCGCCAGCGCGTGGGCATCGCGCGGGCCCTGGCCCTTTCGCCGAAGTTCGTCCTGGCGGACGAGATCGTGTCCGGCCTCGACGTGTCGACGCAGGCGCAAATCCTGACGCTGCTCGAGCGCCTGGCCGACGAAATGGAATTGACCGTCGCCTTCATCAGCCACGACCTCTCGGTCGTGCGCCGCCTGTGCAAACAGGTGATCGTCATGCGCATGGGCGAGATCGTCGAGGCAGGCCCGACCGACACGCTGTTTGCGGCACCTCAGCACCCCTACACGCGTGAACTCATCGCGGCCATTCCGCTGCCCGAGATCGACCCCGACTGGCTGGCTTCGACGCCGGTGGAGGAAAGGGAAATTCAAGCGCCTTCGGGCGCCTGA
PROTEIN sequence
Length: 190
DLQMIFQDPMSSLNPRRTIGAIIAAPLKHNGLTNVGARVAEALERVGLPPAFATRYRHELSGGQRQRVGIARALALSPKFVLADEIVSGLDVSTQAQILTLLERLADEMELTVAFISHDLSVVRRLCKQVIVMRMGEIVEAGPTDTLFAAPQHPYTRELIAAIPLPEIDPDWLASTPVEEREIQAPSGA*