ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3144_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1..1407

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMV8_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 437.0
  • Bit_score: 370
  • Evalue 1.70e-99
phage integrase similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 437.0
  • Bit_score: 370
  • Evalue 4.70e-100
Phage integrase {ECO:0000313|EMBL:ABA06383.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 437.0
  • Bit_score: 370
  • Evalue 2.30e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGTCTGTGGCATATCGGGACCTGTTAGTTCTGATCGCAAGTCGTCATCCCCGCGACTTGATCTCGCCGTTCTTCCGGTTCCTGAGCATGAAGGGCATCCAGCCAACCGACATCCGCGACGAGCATCTCTGCGCCTATGTTGCCTATTGCGGTGCGACCAAATTCAGACCTTTGCGCAACGCTTCGCTCCGATCCTTGGCGCGTCATTTCAACTACTATGCCGAGACAACCGAAGAATGGCCGGATGTTACGCTAGAGGTTCCAGCGACCAAGGCGGCAAATGGCGGCTTGCCATGGGACGAGGTTCCGGCCGGCCTTCGCGACGATATTGAGACCTTGCTGAAGCGGCGTTCACGACCGCACAAGTCCGCCTCTGGACGACGACTGCGAGGCTGCAAGCAATCAACGTTGGATCTTACGCAGCGCCAGCTGAGGGCAGCCATACGCATGGCAGTCAGGACGGGCATCCCCCTTGAAGAGCTTTCGTCGCTTGCGGCCATGCTGCACCCGGATCGCTCAGAGGCAATCATCGATGCCTACTGGCAAGCCGACGGTGAACAACCAGGCACTTACACGATCGAGCTCGCAACCTTGTTCCTCGATCTCGCCCGCAGCGAAACGAAGCTGGACGATGAGGCCTTGATGCGACTGGAGGATATTCAGGCCCTTATGCAAGAACATCGTCGGTCGGGGATGACCGACAAGAACATGGCGCTGGTCCGTCAGGTTCTTGCGACCGACACCTGGACCAAGGTTGTTGGCTTGCCACGTCGCATTTTGGCCGAAGCCAATGCGTATCGCAAAACGCAGCCGATCAAATCGGCCGTGTCTGCGCAACTCGCTGTCGCAATCACGCTGTTGACAATGGCACCCGTTCGCGTCCGCAACCTTGCGACAATCCGGATCGGTCACAACCTTATCCGCCCCAACGGACCGGCAGGCCCGTTTCATCTGATCTTTGCTGCCAATGAGGTCAAGAACGAAGAGCCTTTGGAGTTTCCGCTCAGCGCGCAGGTTACGGCGATGATCGAAACATTTATCCACGATCATCGCCCCGAGCTCATGCGAGGCCACAATCACGACTACCTGTTTCCAGGCGAGGCTGGCAGCCACAAGGACGTCAAGACCCTTGGCGGGCAGATCACCAAGCGCATCGAACGCGAAATCGGCCTGACAGTCACGCCGCACCAGTTCCGCCATGCCGCTGCTGCCCTGATCCTGCGCGCGGATCCGGGCAATTATGAACTCGTTCGTCGCGTTCTGGGTCACAAGTCACTTGCCACCACGACAAGCTTTTACATCGGCCTTGAGACGCTCTCGGCAGCAGAGCGTTTTGGCGAGATCGTAACGGCGATGCTACCGCCCGAGAATGCTCCACCGAGCACCTTCAAGCGCCAGCGAGGCTAA
PROTEIN sequence
Length: 469
MSVAYRDLLVLIASRHPRDLISPFFRFLSMKGIQPTDIRDEHLCAYVAYCGATKFRPLRNASLRSLARHFNYYAETTEEWPDVTLEVPATKAANGGLPWDEVPAGLRDDIETLLKRRSRPHKSASGRRLRGCKQSTLDLTQRQLRAAIRMAVRTGIPLEELSSLAAMLHPDRSEAIIDAYWQADGEQPGTYTIELATLFLDLARSETKLDDEALMRLEDIQALMQEHRRSGMTDKNMALVRQVLATDTWTKVVGLPRRILAEANAYRKTQPIKSAVSAQLAVAITLLTMAPVRVRNLATIRIGHNLIRPNGPAGPFHLIFAANEVKNEEPLEFPLSAQVTAMIETFIHDHRPELMRGHNHDYLFPGEAGSHKDVKTLGGQITKRIEREIGLTVTPHQFRHAAAALILRADPGNYELVRRVLGHKSLATTTSFYIGLETLSAAERFGEIVTAMLPPENAPPSTFKRQRG*