ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3144_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1414..2448

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMV9_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 335.0
  • Bit_score: 264
  • Evalue 9.50e-68
putative integrase similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 341.0
  • Bit_score: 264
  • Evalue 2.70e-68
Putative integrase {ECO:0000313|EMBL:AEI05407.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 341.0
  • Bit_score: 264
  • Evalue 1.30e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAACTCGGCATATCAAGCATTGCCGGTCGAGGATTGGCCTGCCGCCGATCGCATTGCCTGGCAGGACGCCTGCCGGCCCTCGCTGCGCCTTCACAGGGGTGGCAGCGCGTGCCGCATCAAGCCGGTCTCGCGTGTGGCATATTTGCGCGCCTATGGTTATCTGCTCGACTTTTGCCTGCGCACGAACCGTTTCGATCCCCAGGCAGTCGCCGCAGGCCACGTCACGCCAGCAGTGATGGCAGCCTTTCTCATTGAGCTCGAGGCCCGCGTCGGTTCGATCACTCGCCACAACTATCTCAGCCGGATAGAACGCATGACCCGGCTTCTAGCATCCGGGACCGATACCGCGTGGCTGAAGGAAGTGGTGGCCGAACTGAAAGATCAAATCACGCCTCGCAGCAAGGCAGCGCGCATCATCCCTTCCTCACGCCTCCTCCGGCTCGGTCGGGAACTGATTGAACGGGCCAAGGCTTCCGCGACCGGAACGAAACTGCAAATCGCCCGCCTGCATCGCGATGGCCTGATGATCGCCATGCTCGCTCTGTGCCCCATTCGCCTGAAGAACTTTGCCAGCCTCCAGGTCGGTAAGCAGCTTCGCAAGGTCGACGAGCATTGGTGGATCATGCTTGCGGCCGAAGAAACCAAGACAGGCCGGGCGGATCAACGTCCCCTGCCGGCTATCTTGACCCCGATCATCAATCAGTGGATCGACACGTATCGACCGTGCTTCCTTGGGCCCGGTGACGCCTTGTGGGCCTCTACCGCCGGAGGCGCCCTAGCCTATACATATGTCGGGGCGATCATTACCGAGACGGTGAGGCGCGAGCTTGGCGTCGCCGTCAATCCCCATCTCTTCCGCGACTGTGCAGTCTTCACAGTCGCACATAACGCCGGCAGCGAAATGGGCGTGGCGTCGGCACTTCTACAGCATACCGACCGCCGTGTGACCGAAGCTCATTACAATCGCGGCAGCAAGGTCGAAGCCGTCAAAAGCTTCCATAGGATCATAATGGCAATCGAGGAAACAGCCTGA
PROTEIN sequence
Length: 345
MNSAYQALPVEDWPAADRIAWQDACRPSLRLHRGGSACRIKPVSRVAYLRAYGYLLDFCLRTNRFDPQAVAAGHVTPAVMAAFLIELEARVGSITRHNYLSRIERMTRLLASGTDTAWLKEVVAELKDQITPRSKAARIIPSSRLLRLGRELIERAKASATGTKLQIARLHRDGLMIAMLALCPIRLKNFASLQVGKQLRKVDEHWWIMLAAEETKTGRADQRPLPAILTPIINQWIDTYRPCFLGPGDALWASTAGGALAYTYVGAIITETVRRELGVAVNPHLFRDCAVFTVAHNAGSEMGVASALLQHTDRRVTEAHYNRGSKVEAVKSFHRIIMAIEETA*