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SCN18_30_10_14_R5_P_scaffold_3231_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 762..1412

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: probable transcriptional regulator ycf29-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1355B similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 200.0
  • Bit_score: 288
  • Evalue 3.00e-75
Putative transcriptional regulatory protein sgaR {ECO:0000313|EMBL:CDX18663.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 203.0
  • Bit_score: 286
  • Evalue 2.10e-74
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 204.0
  • Bit_score: 270
  • Evalue 4.00e-70

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCACGCAATCATTGGGGTTCGCAAAACGGTCACGACGAGGCTCTTGATTGTCGAGCGCAATCCACTTGTGGTCGCCGCGCTCAAGGACATGATCGAGCATGATCACAGGTTCGAACTCACAAGCGTGGCAGAGGGTGGCGAGGCGCTTCTGGCGATGCTGGAATCCGACCAAGCCGTTTTCGACGTGGCGATCGTGGGTTGGAGACTGTCGGATATGAACGCCGGTGATGTGCTGGAGGAGGTTCAGCGCCGCAACCTGCAAACCAGGATCGTCATTTTTTCGAACGACCACAACGTCGCCATCCTGCGCAAATGCGTGCAATTGGGCGCTCAGGGGTTCTGCTATCAGTTCGACAACCCGAACGTACTCTTCGACACCGTTCAGGCCGTTGCCAACGGGCGCATCTGCATTCCGTATATCGACGTCTCCAAAATCGGCGAAACGTCGCTTTCACGACTTACGCCGCGCGAACTCGAATTGCTGTCCGTGCTCGCCGACGGCTGGACAAACCTGCAAATCGCGACGCGCACCGGCATCTCGGAAAACACCGTGAAGTACCATTTGAAGAACCTCTACGACAAAATCGGCGTTCATAACCGGGCGATGGCCGTGGCCCACTTCATCGGTGAAAGACGTTCGAAGCGATAA
PROTEIN sequence
Length: 217
MHAIIGVRKTVTTRLLIVERNPLVVAALKDMIEHDHRFELTSVAEGGEALLAMLESDQAVFDVAIVGWRLSDMNAGDVLEEVQRRNLQTRIVIFSNDHNVAILRKCVQLGAQGFCYQFDNPNVLFDTVQAVANGRICIPYIDVSKIGETSLSRLTPRELELLSVLADGWTNLQIATRTGISENTVKYHLKNLYDKIGVHNRAMAVAHFIGERRSKR*