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SCN18_30_10_14_R5_P_scaffold_5308_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1759..2325)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE75BA related cluster n=1 Tax=unknown RepID=UPI0003CE75BA similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 185.0
  • Bit_score: 233
  • Evalue 1.30e-58
Lytic transglycosylase {ECO:0000313|EMBL:EZQ16522.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 176.0
  • Bit_score: 241
  • Evalue 6.60e-61
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 193.0
  • Bit_score: 233
  • Evalue 3.60e-59

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGAAATGCCCTCGGTGATCGGGGCGACCCAATCGCCAGCGGCACCCAAGAAGGCCGAGAAAAAGCAGTCTTCGGAGAAGAGCGCCAAGGCTGATGCGACCTCGTCCAAGAAGGCCACCAAGACTGCGTCGAAGAAGTCCAAGAACGAGACCAAGCAGGTTGCTTCGAACTCTGCGAGCGGGCCGCGCTTCAACACGATCATCCAGCGCTATGCGGCCAGCTACGGCGTGCCGGTTTCGCTGGCGCATGCGGTCATCAAGGTCGAGAGCAACTACCGCACGAACGTCGTGGGAAGTGCCGGCGAGATCGGCCTTATGCAGATCAAGCCGGCAACGGCCCGGATGATGGGCTACAGCGGTTCCGCCAAGGGGCTGTTCAATCCCGAGACCAACATCAAGTACGGCATGAAGTACCTCGCCATGGCGCATGACCTCGGCGGCGGCACGACATGCGGGACGATCCTGAAGTACAATGCGGGCCATGCGGCGCGCCGCATGAATCCGGTCTCGTCTGCCTATTGCAGCAAGGTGAAGGTGCAGATGGCGGCGCTCGGCTCGTCAATCTGA
PROTEIN sequence
Length: 189
MEMPSVIGATQSPAAPKKAEKKQSSEKSAKADATSSKKATKTASKKSKNETKQVASNSASGPRFNTIIQRYAASYGVPVSLAHAVIKVESNYRTNVVGSAGEIGLMQIKPATARMMGYSGSAKGLFNPETNIKYGMKYLAMAHDLGGGTTCGTILKYNAGHAARRMNPVSSAYCSKVKVQMAALGSSI*