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SCN18_30_10_14_R5_P_scaffold_5363_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2319..2837

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HUA1_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 173.0
  • Bit_score: 214
  • Evalue 4.30e-53
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:ETM67282.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 173.0
  • Bit_score: 214
  • Evalue 6.10e-53
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 206
  • Evalue 4.40e-51

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGTCGATCCATTCGAAACCTACCATCTCCCGCTCGGCGACTGGATTCAAACCTTCCTTGACTATGTCGTCAAAGAGTACAGGCCGATCTTTCATGCGATACGCGTCCCCGTCGGGACTGTTCTAGACGGTATCGAGCAAGCGCTGATCTCTACAAACCCGATCGTTTTCCTCGTCCTGTTGTTCTTGTTCTGCTGGCAGTTCACTACGCTGCGCACAGCCATTTTCTGCACGCTTGCCATGACCCTCATGGGCATTCTTGGCATGTGGGAGGAATCGATGACGACCATCGCGCTGGTGCTTTCATCGGTGCTGTTTGCCGTCGCCATCGGGTTGCCGCTCGGAATCTGGTCCGCCAAAAGCGATCGCGTCGAGTCGATCCTGCGGCCGATCCTTGACGTCATGCAGACGCTGCCTGGTTTCGTCTACATGGTGCCGGTGGTCATGCTGGTTGGCATCGGCAATGTGCCGGGCATCATCGTAACGGTGGTGTTTGCGCTGCCGCCGATCATCCGTCTG
PROTEIN sequence
Length: 173
MVDPFETYHLPLGDWIQTFLDYVVKEYRPIFHAIRVPVGTVLDGIEQALISTNPIVFLVLLFLFCWQFTTLRTAIFCTLAMTLMGILGMWEESMTTIALVLSSVLFAVAIGLPLGIWSAKSDRVESILRPILDVMQTLPGFVYMVPVVMLVGIGNVPGIIVTVVFALPPIIRL