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SCN18_30_10_14_R5_P_scaffold_5467_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..521)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SWA2_AMYOR similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 3.00e-30
LysR family transcriptional regulator {ECO:0000313|EMBL:KDN86601.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 163.0
  • Bit_score: 141
  • Evalue 1.10e-30
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 8.60e-31

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGAATGATTTCACGCGCGTTGAAGCTCTCAATCTTCGCCATCTCAGGGCCTGGATCACAGTTACCGATGAAGGCGGCATCACCGCAGCCGCAAGAAAGCTGGGCGTTTCCCAACCGGCTCTGTCCCAACAATTGCAGGCGTTGGAAGACTTTTTTGGCGGCAAGCTGTTAGAGCGGCTGCCAAGAGGTGTGCAGCCGACCCCGTTCGGAAGAGCACTGCTAAATGATGCGCGTGCCACCTTGGCAATGGCCAGCAAATTGACGCGCAGCGCACGCAGCGCGATGGGGCTGGAGCATGGGGTGCTGGAGCTCGCCACCCTGCCAACCCTTGTCGAAGCCATCATGCTTGAGCCGATCCGGAACTGGCAGGCACAGCATGGCGACGTGGCCATTCGCATCAAGGAATTTACATTGCAGTCAAAGATGATCGAGTCGGTCGCAATGGGTGAAGGCGACATGGCAATTGGCGTCAGACCACCGCGCTGGACAGGCGACATTATCGAGCTTGGCTGGGAGCGG
PROTEIN sequence
Length: 173
MNDFTRVEALNLRHLRAWITVTDEGGITAAARKLGVSQPALSQQLQALEDFFGGKLLERLPRGVQPTPFGRALLNDARATLAMASKLTRSARSAMGLEHGVLELATLPTLVEAIMLEPIRNWQAQHGDVAIRIKEFTLQSKMIESVAMGEGDMAIGVRPPRWTGDIIELGWER