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SCN18_30_10_14_R5_P_scaffold_5584_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1..1440

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5U0Q0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 486.0
  • Bit_score: 296
  • Evalue 4.10e-77
TraG_1 protein {ECO:0000313|EMBL:KIT16375.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 476.0
  • Bit_score: 524
  • Evalue 9.90e-146
Type IV secretory pathway, VirD4 component similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 486.0
  • Bit_score: 296
  • Evalue 1.20e-77

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
AGCGGCATTTACGGCACGGCGGCGTTCATGACCGGCGATGCCGCCGCGCGAGCCGGGCTGACCGATCCGGCGGGCCTGTTCCTTGGATCGCTCGGTGGCCGATTGCTGTTTCACAATGGCAAGGCGCACCTGATTACCGTTGCACCCGCCCGCAAGGGCAAGGGAATCTCGGTCGTGGTGCCCAACCTGCTGCACTGGCAAGGCAGCGTGTTCGTCACGGACGCGAAGGGCGAACTGGCTGCCGTCACAGCAGCGCACCGCCAGAATACGTTCGGCCAGAAGGTTTTTGTGGTGAACCCCTGGGGTCTGCACGGCCTGCCGCAACACCGCTTCAATCCATTGGCCTATCTGGTCGACCTCGATGATGACGAGGCCGTCCGGCGCGGGTTGACCGAGGAAGTCGCGGCGCTGGCGCTGCAATTGCTCCCGGAGCCGGAGGATGCGCGAAACCGCTATTTCCGAGAGGGCAGCCGCAAGCTGCTCAGGGCGCTGATGCTGCATCTGGCAACGCGCCAAGTGCGGGGAGACTGTACGCTGCCGGAGCTGTGGCGGCTTCTACAGAACAGCGGGAAACTCGACGCCGCACTGGCCGACATGGCCGGTTCCGACGCGCTCTCCGGCGTCGTTGCCGATCTCGCCGATGACATTGCCGGCATTATCGAGAAGAGCCCTGAAGCCTTCCAGAGTTTTGTCGAGGGCGCACGGCAGACCGTGTCGATCTTCGATCCGTCCGGCTGGCTAGCCGACAGCGTCAGTGCTTCCGATTTCTCCTTCGCCGATCTCAAGACCGGGAAGGTCAGCGTCTATCTGGTCGTGCCACCTAAGCGCATCGAAACGCATGGCGCGTGGCTCGGCCTGCTCACCCGGCAGGCGATCAACGATGTCGCCGGCACGCCGGGCGGGAGAAAAGTGCTCTTCATGCTCGATGAGTTCGCCAACATGGGCAAGCTCGCCAGCCTGTCGGAAAGCCTGACGCTGCTGCCGGGACTGGGCGTGCGGGTCTGGATGGTCGTGCAGTCGCTCGATCAGCTTCGCACCGTCTACGGGCGGGAAGCGACGAACACGATCCTGAGTCAGGCGGAAGTCCAGCAGTTTTTCGCGGTCCAGGATCATGGCCTGACGAAAATGCTGTCGGACGCGCTCGGCCAGCGGACGGTCAAGACCGCCTCCATCAATCTCGGGCGCAAGGAGGACGACGATCCCGGCGAAAGCAAGAGTGAGACCGGACGGCCGCTGATGAGCCCGGACGAAATCCGCCTTATGCCGGACACCGAGCAACTGCTGCTGATCCAGTCGCAGCCGCCGATCCGAGCGCGGCGTGTGCCCTTCTGGGAGGTCGCGCCGTGGCGCGACTGGGCCGCCCCCAATCCGGTCGAGGGCACCCATCCGCGCCCGGAGCCTTCATTTCGCCTGAACTACAAGGAGAAGCCCTATGTCTGA
PROTEIN sequence
Length: 480
SGIYGTAAFMTGDAAARAGLTDPAGLFLGSLGGRLLFHNGKAHLITVAPARKGKGISVVVPNLLHWQGSVFVTDAKGELAAVTAAHRQNTFGQKVFVVNPWGLHGLPQHRFNPLAYLVDLDDDEAVRRGLTEEVAALALQLLPEPEDARNRYFREGSRKLLRALMLHLATRQVRGDCTLPELWRLLQNSGKLDAALADMAGSDALSGVVADLADDIAGIIEKSPEAFQSFVEGARQTVSIFDPSGWLADSVSASDFSFADLKTGKVSVYLVVPPKRIETHGAWLGLLTRQAINDVAGTPGGRKVLFMLDEFANMGKLASLSESLTLLPGLGVRVWMVVQSLDQLRTVYGREATNTILSQAEVQQFFAVQDHGLTKMLSDALGQRTVKTASINLGRKEDDDPGESKSETGRPLMSPDEIRLMPDTEQLLLIQSQPPIRARRVPFWEVAPWRDWAAPNPVEGTHPRPEPSFRLNYKEKPYV*