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SCN18_30_10_14_R5_P_scaffold_4580_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1300..1902)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=4 Tax=Mesorhizobium RepID=V7EZH2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 196.0
  • Bit_score: 275
  • Evalue 3.10e-71
TetR family transcriptional regulator {ECO:0000313|EMBL:EXL05364.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 200.0
  • Bit_score: 323
  • Evalue 1.80e-85
putative transcriptional regulator protein, TetR family similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 193.0
  • Bit_score: 278
  • Evalue 1.00e-72

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGAGCATTGAAGAAATCACGCTGGATTCAACGCGCCAGGAAAATGTGGAGCGCATTCTGGAAGCGGCCGAGCGCCTGTTTCGACATTACGGCTACAGCAAGACCACGGTGGCCGATATTGCGCGCGACCTCGGCATGTCGCCGGCCAATGTCTACCGCTTCTTCGCCTCCAAGGAACAAATCCACCAGGCGATTGCCGGGCGCATGCTGGCTGCCGCCATCAGCCTACACCGTGCAATATCCGCGCTGCCGCTGCCCGCCGCCGAGCGCCTGCGCCGCTGCATCCTGGAGCAGCACAAGGTGACGGTGGAGACCATGCTGGATCAGCAGAAGGTGCACGAGATGGTGATCGTCGCCATCGAGCGTGATTGGCAAGTGATCGACAAATACATCGACGAGCTGAACCTGATCCATGCCGATATCATCGAGGAAGGCATCCAGGCAGGTGAGTTCGCCAAGCAGGATTCGGCAATTGCCGCACGCTGTTTTGGCGCCAGCACGGCCATCCTTTGCCACCCGCAACTGGTGGCGCAGTGCCTGATGAAAGACAATCGCGCGACCCCCGAACAGTTGGTCGACTTTGCGATCAAAGCCTTGAAATAA
PROTEIN sequence
Length: 201
MSIEEITLDSTRQENVERILEAAERLFRHYGYSKTTVADIARDLGMSPANVYRFFASKEQIHQAIAGRMLAAAISLHRAISALPLPAAERLRRCILEQHKVTVETMLDQQKVHEMVIVAIERDWQVIDKYIDELNLIHADIIEEGIQAGEFAKQDSAIAARCFGASTAILCHPQLVAQCLMKDNRATPEQLVDFAIKALK*