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SCN18_30_10_14_R5_P_scaffold_1661_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(718..2220)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEB253 related cluster n=1 Tax=unknown RepID=UPI0003CEB253 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 504.0
  • Bit_score: 772
  • Evalue 1.60e-220
Pilus assembly protein CpaC {ECO:0000313|EMBL:ESW85694.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 504.0
  • Bit_score: 772
  • Evalue 2.20e-220
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 503.0
  • Bit_score: 748
  • Evalue 6.80e-214

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGTCATATCGCAAACTGCCGGCCACGCTCGCCGCAACATTGGCTCTGATGTTCATCGGAGCGGGCACGCTTCCGATAACCGATGCGAACGCGGCGGGAGGCACCCGGGTTGGCGCCACGTCCGCGAACCAGCGCGTCAAGCTGGGGCTCAACAAGTCCGTCGTCATCGACCTGCCAAGCGACGCCTACGATATCCTGGTGGCCAATCCTTCCGTTGCCGATGCAGTAACCCGCACTTCGCGGCGCATCTACCTGTTCGGCAAGGCGGTCGGTGAAACCAACATCTTCGTGTTTGGACCGAACGGCGAGCAGATCGTGAGCCTCGACCTCGCTGTCGAGCGCGACGTTGCCGGCCTCGAAGATTATCTCGAACGCTTTATCCCGGGTTCGGACATCAAGGTCGAACTGCTGAACGACAACGTCGTCCTGACCGGAACGGTCGAGACGCCATTGGACGCCAAGCGTGCAAGCCAGCTTGCGCAGGCTTTCGTCAAGGGCGGTGAAGCAACGACCGGCCAGTATTCCCAGACGGCTGCCGGCGGGTCCGCCAACGGCGGCGTCGATATCGACAATCCAGACTCCGAACGTCAGGTAAGCGCCATCATCAACATGCTCCAGATCATGGGCGAAGACCAGGTCACGCTAAAGGTGACGGTCGCCGAAGTCAGCCGCTCCGTCATGAAGCAGCTCGGTGTCAACATGATCGGCAACGGCGGCAGCAATGGCATCATGTGGAGCGCGCTGAGCCAGACCTATCCGGGCCTTGGCAAGGTTCTTTCCGACTCGAACCTGACAGTCGGCAACTCGGACCTGCGCGCCTACTTCAACGCGATGGAACAATCGGGCGTGATGAAGACGCTGGCCGAGCCGACATTGACGGCGATCTCGGGCGAGAAGGCCACCTTCAAGGTTGGCGGCGAATACAACATTCTGAGCCAGGCCAGCAACCAGCAGAACGACGACGGCACGTCCGAGCGTTCCTATACGCACAGGACGGTCGAATACGGCATCGGTCTCGAATTCCAGCCGGTGGTTCTTTCGGCCGGGCGCATCAGCCTGAAGGTCAGGACGTCTGTCTCCGAGCCGACGACCGAAGCGTCGATCTCCATGCATGACTCGAACATCATCTCGATCCGCAAGCGACTGGCCGACACCACTGTCGAGTTGCCGTCAGGCGGCTCCATGATGATCGCGGGTCTCGTTCGCGACGATATCCGCCAGGCGGTCAACGGGATGCCGGGCCTCACCAAGATCCCGGTACTGGGCACCTTGTTCCGCAGCCGGGATTTCGTCCGCAACGAATCCGAACTGGTCATCATCATCACACCTTATCTGGCTCGCCCGGTCGCTCGAAACGACCTTGCCAAGCCCGATGACAACTTCAATGCCGCAAGCGACGGCGCCGGGATGTTCCTCGGCCGCGTCAACCGGGTTTACGGCACCATGCAGACGGATAGGCCCGCAGGACGCTACCACGGCGTTGTTGGCTTCATCTACAAATGA
PROTEIN sequence
Length: 501
MSYRKLPATLAATLALMFIGAGTLPITDANAAGGTRVGATSANQRVKLGLNKSVVIDLPSDAYDILVANPSVADAVTRTSRRIYLFGKAVGETNIFVFGPNGEQIVSLDLAVERDVAGLEDYLERFIPGSDIKVELLNDNVVLTGTVETPLDAKRASQLAQAFVKGGEATTGQYSQTAAGGSANGGVDIDNPDSERQVSAIINMLQIMGEDQVTLKVTVAEVSRSVMKQLGVNMIGNGGSNGIMWSALSQTYPGLGKVLSDSNLTVGNSDLRAYFNAMEQSGVMKTLAEPTLTAISGEKATFKVGGEYNILSQASNQQNDDGTSERSYTHRTVEYGIGLEFQPVVLSAGRISLKVRTSVSEPTTEASISMHDSNIISIRKRLADTTVELPSGGSMMIAGLVRDDIRQAVNGMPGLTKIPVLGTLFRSRDFVRNESELVIIITPYLARPVARNDLAKPDDNFNAASDGAGMFLGRVNRVYGTMQTDRPAGRYHGVVGFIYK*