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SCN18_30_10_14_R5_P_scaffold_1661_9

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 7176..8063

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 295.0
  • Bit_score: 498
  • Evalue 6.10e-138
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FI44_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 295.0
  • Bit_score: 498
  • Evalue 4.40e-138
formamidopyrimidine-DNA glycosylase Fpg similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 296.0
  • Bit_score: 492
  • Evalue 6.80e-137

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCCTGAACTTCCGGAAGTCGAAACCGTCAGGCGTGGGTTGCAGCCGGTCATGGAAGGCGCGCGCATCGTCAGCGTCGAAGCCCGGCGGCCGGATCTGCGCTTTCCCTTCCCGGAAAGGTTCACGGAGCGGTTGACGGGCAGCACCATCACCGCGCTTGGACGTCGCGCCAAATATCTCACCATGCACACCGACGGCGGACCGACCCTGATCTGCCATCTCGGCATGACCGGATCGTTCCGCATCGAGGCTGGCGAGGAGAGCGCCACGCCCGGCATCTTCCACTATGAGCGGTCCAAGGACGCCGCCCACGATCACGTCGTCTTCAACCTCGCCTCCGCGCAAGGCGCACACCGCGTGGTCTTCAACGACCCGCGCCGGTTCGGCTTCATGCTGTTCAGCGAAACGGTGCCCGACGAGCATCCGATGCTTTCCGGCCTCGGCGTGGAACCCACGGGCAACACGCTCGACGGTCCGCTGCTTTCCTCCCTGCTGAAAGATCGCAGGACGCCGCTCAAGGCAGCCCTGCTCGACCAGCGCCTGATTGCCGGCCTTGGCAATATCTATGTCTCCGAGGCGCTGTGGCGCGCGCGTCTCTCCCCATTGCGGGCGGCAGGAACAATCGCCACGAGCGGCAAAAAGGCCAAGGCGCAAAGCGAGCGACTTGCCGAGGCCATCCGCTCCGTCATCGCCGATGCGATTGCCGCAGGCGGCTCGTCGTTGCGCGACTATATGCATACGGACGGCTCGCTCGGCTATTTCCAGCACTCGTTTGCAGTCTACGACCGCGAAGGCGTTGCCTGCCCGACGCCGGGCTGCACCGGCCATGTCGAGCGAATCGTACAAAGCGGCCGTTCCACCTTCTATTGCCGGGCTTGCCAGGAGTAA
PROTEIN sequence
Length: 296
MPELPEVETVRRGLQPVMEGARIVSVEARRPDLRFPFPERFTERLTGSTITALGRRAKYLTMHTDGGPTLICHLGMTGSFRIEAGEESATPGIFHYERSKDAAHDHVVFNLASAQGAHRVVFNDPRRFGFMLFSETVPDEHPMLSGLGVEPTGNTLDGPLLSSLLKDRRTPLKAALLDQRLIAGLGNIYVSEALWRARLSPLRAAGTIATSGKKAKAQSERLAEAIRSVIADAIAAGGSSLRDYMHTDGSLGYFQHSFAVYDREGVACPTPGCTGHVERIVQSGRSTFYCRACQE*