ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1680_11

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(8283..9122)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=3 Tax=Rhizobium meliloti RepID=F6EAM6_SINMK similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 253.0
  • Bit_score: 308
  • Evalue 3.60e-81
ABC transporter permease {ECO:0000313|EMBL:EZQ17507.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 183.0
  • Bit_score: 333
  • Evalue 2.50e-88
putative permease of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 255.0
  • Bit_score: 312
  • Evalue 9.10e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
CGCGACGAGCTCGCCCGGCGAGAGATCGTATTCCTCGGATGCGAGGCCGAAGCCGTCCTTACCGAAGTTGAAAACCATGTTGTTTACCTGAACGACAACGATGCCATTAGCGCAGGCCGCCGGAACCTGTACGCCACCGGATACCCCGGGCGCCACATCGAAGCGCTCGTCGCCGGTGATCTCTTTGACCTCGTCGTTCAGGTGGAAGCCGACTGGAGTCCGCCAGATTTCTTCCCCGGTATCGGCGTTAGCGGCGATCACCGTACCGGTTTTGCCACTGCCGATCGCCAGCTTCTGCTCGGTGCCGTGCTGCTTCCGTTGTGGACGTCGCTTCTGGTGCGCACTGCCGCCTGGTTCATCCTGCTGCAGGAAAAGGGCCTCATCAACGACATGCTGATCAGCCTTGGCCTCATCGACGGCCCGCTGCCGCTGATCTTCAACCGCCTTGGCGTGGTCATCGCCATGACGCATGTACTGCTGCCGTTCATGGTGCTGCCGATCTATTCGGTGCTGCTTGCCATTCCAAAGAACCTGATGCCGGCGGCTGCCTCGCTCGGCGCACCGCCATGGCGGGCGTTCCTGCGCGTGCTTCTGCCGCTCAGCCTGCGCGGCGTGGTGTCCGGCTCGCTGCTCGTGTTCATGACGGCCATCGGCTACTACATCACGCCGGCCCTGATCGGCGGGGCGCAGGACCAGATGATCTCGTCGGTCATCGCCTTCTACGCCATCGGCTCGGCCAACTGGGGCATGGCCGGCGCGCTCGGCGCAATCCTGCTTGTGGCGACGCTGGCGCTCTACGCCGTCTACGGCCGCCTGTCGTCTGATCGTGGAGCCCTGTGA
PROTEIN sequence
Length: 280
RDELARREIVFLGCEAEAVLTEVENHVVYLNDNDAISAGRRNLYATGYPGRHIEALVAGDLFDLVVQVEADWSPPDFFPGIGVSGDHRTGFATADRQLLLGAVLLPLWTSLLVRTAAWFILLQEKGLINDMLISLGLIDGPLPLIFNRLGVVIAMTHVLLPFMVLPIYSVLLAIPKNLMPAAASLGAPPWRAFLRVLLPLSLRGVVSGSLLVFMTAIGYYITPALIGGAQDQMISSVIAFYAIGSANWGMAGALGAILLVATLALYAVYGRLSSDRGAL*