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SCN18_30_10_14_R5_P_scaffold_4933_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2731..3102)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Frankia sp. QA3 RepID=I9A2Z5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 106.0
  • Bit_score: 87
  • Evalue 7.40e-15
Transcriptional regulator {ECO:0000313|EMBL:EIV93786.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 106.0
  • Bit_score: 87
  • Evalue 1.00e-14
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 106.0
  • Bit_score: 85
  • Evalue 6.10e-15

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
GATCCGGTTGCCCTGCGATCGCTGTCGGACAGGAACTGGGTACTCTATGAGCCGAGCAACGGACTAGCCGACTACGTCGCGGCTGCCTGCGCCGTAGCCGGATTTCGGCCCCGAATGGCCGTGCTCACATCTCAGGCTCACGTAGCGATCAATCTGGCAACTGCCGGTCTGGGCGTCGCACTCGTGCCATCGATGAACGTACCGGGCCATCTGACCGGGAAGACGCGAGAGTTGCTGGAGCCGGTGTCCTGGCAACTCGCGGCATTCTGTCGAACTGAGTTCTCCGCACCAGCGGCAGAATTCGTTCGATTGCTACAGCAATTGACATGGCCGTCTGCGCCAAAGGATGCAATCGTCCTTCCGGGCAATTGA
PROTEIN sequence
Length: 124
DPVALRSLSDRNWVLYEPSNGLADYVAAACAVAGFRPRMAVLTSQAHVAINLATAGLGVALVPSMNVPGHLTGKTRELLEPVSWQLAAFCRTEFSAPAAEFVRLLQQLTWPSAPKDAIVLPGN*