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SCN18_30_10_14_R5_P_scaffold_4289_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2705..3244)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDL5_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 179.0
  • Bit_score: 313
  • Evalue 7.10e-83
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 179.0
  • Bit_score: 313
  • Evalue 2.00e-83
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV09794.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 179.0
  • Bit_score: 313
  • Evalue 1.00e-82

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGAGCCGAAGGATATCACCAAGCTCATTCTCCGGACTTCGATGAAGGACCGGGCGGCGTTCGATCTGCTCTATCGGCAGACGAGCGCGAAACTTTTCGGCGTGTGCCTGCGTGTCTTGAACGATCGGGGCGAGGCGGAAGACGCGCTGCAGGACGTCTACGTCAAGATTTGGACCAAGGCCGACCGTTTCGCGGTGTCCGACCTCAGTCCGATATCCTGGCTGGTGGCGATTGCGCGCAATCATTCCATCGACCGCATCAGGGCGCGGCGCCAGCCGGCTGCCGACATCGAGACCGTGCTCGACGTGGCCGACCCGACCCCCGGCCCGGAGGCTGCGGCGGTGTCGGGCGATGAAGCCGGCCAGATCCACCGCTGCCTCGAGGAACTGGAAGACGACAGGGCCGGTGCCGTTCGCGGCGCCTACCTGAAAGGTGAAAGCTATGCCGAGCTGGCAGAGCGCTATGACGTACCGCTCAACACGATGAGGACCTGGCTGCGGCGCAGCCTGATGAAACTGCGGGAATGCCTGGAAAGATGA
PROTEIN sequence
Length: 180
MEPKDITKLILRTSMKDRAAFDLLYRQTSAKLFGVCLRVLNDRGEAEDALQDVYVKIWTKADRFAVSDLSPISWLVAIARNHSIDRIRARRQPAADIETVLDVADPTPGPEAAAVSGDEAGQIHRCLEELEDDRAGAVRGAYLKGESYAELAERYDVPLNTMRTWLRRSLMKLRECLER*