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SCN18_30_10_14_R5_P_scaffold_2224_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3298..3582

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: DNA-binding protein HU homolog n=1 Tax=Pantholops hodgsonii RepID=UPI0003C198A1 similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 94.0
  • Bit_score: 187
  • Evalue 4.00e-45
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 94.0
  • Bit_score: 187
  • Evalue 7.40e-45
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 94.0
  • Bit_score: 185
  • Evalue 4.30e-45

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGATCAAGTCTGAACTCGTGCAAATTATCGCCACGCGCAATCCGCATCTTTTCCTGCGCGATGTCGAAAATATCGTCGGCGCGGTGTTCGATGAGATCACTGATGCGCTCGCCGAGGGCAACCGCGTGGAACTGCGCGGCTTCGGCGCCTTTTCGGTCAAGAACCGCCCTGCCCGCACGGGACGCAACCCGCGCACCGGCGAATCCGTCGACGTCGAGGAAAAGTGGGTGCCGTTCTTCAAGACCGGCAAGGAGTTGCGCGAGCGACTGAACGGCGACAAATAG
PROTEIN sequence
Length: 95
MIKSELVQIIATRNPHLFLRDVENIVGAVFDEITDALAEGNRVELRGFGAFSVKNRPARTGRNPRTGESVDVEEKWVPFFKTGKELRERLNGDK*