ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3936_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..428)

Top 3 Functional Annotations

Value Algorithm Source
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGB5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 140.0
  • Bit_score: 172
  • Evalue 2.60e-40
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit {ECO:0000313|EMBL:EKS41677.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 140.0
  • Bit_score: 172
  • Evalue 3.70e-40
fbiC; FO synthase similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 128.0
  • Bit_score: 169
  • Evalue 3.70e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGAATAGACTGTCGTTCGAAGAAGCTGTCAGGATTGGTTCCAAGTTACCGATCAAAGAACTGGCGGCGCTTGCTTCGGAAACATGCGCCGCAGCGCACGGACATACCGTAACCTATTCGCCAAAGGTGTTTATTCCTCTCACCCAACTTTGCCGTGACGTCTGCCACTACTGTACCTTCGCCAAGGCTCCAAGAAATCTAAAACAGCCTTACCTTTCGATCGACGAAGTCCTCGATGTTGCAAAAGCCGGAGCCAAGGCTGGTTGCACCGAAGCGCTGTTTACGCTGGGCGACAAACCGGAGCTTCGTTACAATTCCGCGGCCAAAGCACTCGAAACGATGGGCTATTTAACGACGCTGGATTACGTAAGGGCGGCGGCGGAAATCGTACTTAAGGAGACGGGCCTTCTCCCCCACATCAACGCC
PROTEIN sequence
Length: 142
MNRLSFEEAVRIGSKLPIKELAALASETCAAAHGHTVTYSPKVFIPLTQLCRDVCHYCTFAKAPRNLKQPYLSIDEVLDVAKAGAKAGCTEALFTLGDKPELRYNSAAKALETMGYLTTLDYVRAAAEIVLKETGLLPHINA