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SCN18_30_10_14_R5_P_scaffold_6222_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2000..2428)

Top 3 Functional Annotations

Value Algorithm Source
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EZQ16700.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EZQ16700.1};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 142.0
  • Bit_score: 239
  • Evalue 1.90e-60
succinate-semialdehyde dehdyrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FBF18D similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 142.0
  • Bit_score: 233
  • Evalue 1.30e-58
succinate-semialdehyde dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 142.0
  • Bit_score: 232
  • Evalue 6.10e-59

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
CTCGACGATGCCGTCGGCAAAGGGGCCAGGGTCGTTGCCGGCGGACAGCGCCATTCGCTGGGTGGCACGTTTGTCGAGCCGACAGTTTTGACCGGGGTGACTTCGACCATGCTTGTGGCGCGCGAGGAGACGTTCGCTCCGCTTGCGCCCATTTTCCGGTTCGAGACGACCGAGGAGGTCGTCAGGCTTGCCAACGACACCGAGTTTGGTCTTGCCTGCTACTTCTATACCGGCGACCTCGGCCGCGCCTTCCGTGTCATGGAAGGCCTGAAATACGGCATGGTTGGCGTCAATGAAGGTATCATCACCACGCCCGAAGCGCCGTTCGGCGGCGTCAAGGAGTCCGGTCTTGGCAGCGAAGGCGGCTATCAGGGCATGACTGACTATCTCGACACCAAGTATGTCTGCATCGGCGGCCTCGGCCTCTGA
PROTEIN sequence
Length: 143
LDDAVGKGARVVAGGQRHSLGGTFVEPTVLTGVTSTMLVAREETFAPLAPIFRFETTEEVVRLANDTEFGLACYFYTGDLGRAFRVMEGLKYGMVGVNEGIITTPEAPFGGVKESGLGSEGGYQGMTDYLDTKYVCIGGLGL*