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SCN18_30_10_14_R5_P_scaffold_5969_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..1430)

Top 3 Functional Annotations

Value Algorithm Source
Autotransporter-associated beta strand n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H3N7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 494.0
  • Bit_score: 248
  • Evalue 9.70e-63
Uncharacterized protein {ECO:0000313|EMBL:ETR76484.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 486.0
  • Bit_score: 287
  • Evalue 2.70e-74
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 470.0
  • Bit_score: 213
  • Evalue 1.30e-52

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGGGGCGATCGTGTTCGATGCCAGTGCGCAGGCCTATACGTTCAACTTCGACGGTATTGCCTCCATGGCTTTTACCGGGGCCGGCATCGTCAACAATTCAAGCCAAGACCAAACCTTCAACAATTCCATAGGGCTGGATTTCGACAACTCGAGTTCGATGGGCAACACCATCGTCTCGAATTTAGGCGGCATCAACATGCGTGACAGCAGCTCGGCTGGTTCCGCCACCATAACCAACCCCGGTTCCATCGGTTTTCTGGATACCAGTTCGGCTGGTACGGCAAAGATTTTCAACGTTACGAATCCTATCAACAACGGTTTGCTGCGCTTCTTTCAATCCAGCACTGCCGGCCAAGCCGAGATCAACAACGCAAGCGGCGCGACGTTGCAGTTTCTGGATGCCTCTTCGGCGGGCAATGCGCAAATCACCAATGAATCCGGTGGCAACCTGTCGTTCGGCCAGATAGCTATTGGCGGATTTGTCGACACCTCAAAAATTTCGTCGGGGGGAAATTCCACTATTATCAATGATGGCTCCCTTACATTTGGACCTTTCAGCACGGCGGGCAATGCGAACATAACCAACAACGGCACAATGATGGTGACCGAGGTTTCGAACGCCGGTAGCGCGACCATCGTCAACACCGGCACCGTGACGTTTCGCAGTGTGAGAAGCTCCCCGATCGGCGCATCGCAGCCGACGTCCGCAAAAGACGCCACGATCACCAACAATGGTCGACTGGAGTTTGTGGACAATGCAACAGGTGGCAACGCAGCCATCAACAATGGCAGTACGGGAATTGTGGATTTTTCCGCGACCCGGCTAGCGCCCACGATCGGGTCCATCGCCGGTAGTGGCAACATTTACCTGGGTCAGCTTGGTCTTTCGATCGGCGGGAACAATCTCTCGACCGTCTTTTCCGGCTCGATCGGCAATTGTGCCGTTGGGCAACCGTGCACAACTCGGTCTCCTTTTGGCGGACGCATCACCAAGACAGGCACCGGCACGCTGACGCTGGCCGGAACAAACGCCTACCTTAGTCCGACGGAAGTCCTTGGCGGCACGCTCTTGGTGAATGGCAGCATTTCGAGCTCGGAAAGCGTGTTTGTGGGTGCAGGCGGCACGGTTGGCGGCGTTGGCACTTTGTCGTCGACCATCATCGATACGGACGGGACGCTCGGCGCAGGCAATAGCTCGATCGGCACTCTTACGGTAGCCGGCGATCTTACTCTGAAGACTGGAAGCAAATACGCGGTGGATGTGTCGCCGACCGTCGCCGATAAGATTTCCGTTACAGGCAGCGCAACACTCGCCGGCGCAGTCGAAGCAAGCTTCGGCGCGGGTTCCTACCTTCCCAACAGCTATGTCATCTTGTCGGCGACCGGTGGATTTGGCGGCACCACATTTGACGCCTTCAACATTGTC
PROTEIN sequence
Length: 476
MGAIVFDASAQAYTFNFDGIASMAFTGAGIVNNSSQDQTFNNSIGLDFDNSSSMGNTIVSNLGGINMRDSSSAGSATITNPGSIGFLDTSSAGTAKIFNVTNPINNGLLRFFQSSTAGQAEINNASGATLQFLDASSAGNAQITNESGGNLSFGQIAIGGFVDTSKISSGGNSTIINDGSLTFGPFSTAGNANITNNGTMMVTEVSNAGSATIVNTGTVTFRSVRSSPIGASQPTSAKDATITNNGRLEFVDNATGGNAAINNGSTGIVDFSATRLAPTIGSIAGSGNIYLGQLGLSIGGNNLSTVFSGSIGNCAVGQPCTTRSPFGGRITKTGTGTLTLAGTNAYLSPTEVLGGTLLVNGSISSSESVFVGAGGTVGGVGTLSSTIIDTDGTLGAGNSSIGTLTVAGDLTLKTGSKYAVDVSPTVADKISVTGSATLAGAVEASFGAGSYLPNSYVILSATGGFGGTTFDAFNIV