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SCN18_30_10_14_R5_P_scaffold_7717_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 302..1921

Top 3 Functional Annotations

Value Algorithm Source
Putative Acr/RND family transmembrane transporter n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MBH1_RHIL3 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 540.0
  • Bit_score: 932
  • Evalue 1.70e-268
Multidrug transporter AcrB {ECO:0000313|EMBL:EZQ14205.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 540.0
  • Bit_score: 974
  • Evalue 5.40e-281
acriflavin resistance protein similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 540.0
  • Bit_score: 937
  • Evalue 1.50e-270

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATGACGACCTCGACTGACGAAAAGAAGCCGTTCAACCTTTCCCGTTGGGCGATCGGCCATCCCAGCATCGCGCGTTTTCTCGTTGGGCTGATCATCGTTGCCGGCGCGCTCGGCCTGATGCGCATGGGCCAGCGCGAGGACCCGGACTTCACCTTCCGCGTCATGGTGGTGCAGGCTGTGTGGCCCGGCGCTTCGCTAACGGACATGGAAGATCAGGTCGTCAACAAGATCGAGCGCAAGCTGCAAGAGACGCCGCACCTCGATTTCGTGAAGTCCTACTCGCGCGCCGGCAGCGCCATCATCATGGTGCAGGTCAAGGGCGATACCGACGCGGCACAAGTAGCGGACGCCTTCTACCAGGTGCGCAAGAAGGTCGGCGATATCAGGAGCGAGTTGCCGTCGGGCCTGCTCGGTCCCTTCTTCAACGATGAATTCGGCGACACATTCATCACCCTGCATTCCATCAGCGGCGACGGCTACAGCTACCCCGAACTCAAGCAGTTCGCCATTCAGGCGCGTGACATGCTGTTGACGACGCCTGGCGTCGAAAAGGCTGTCATCATCGGTGACCAGCCGCAGGTCATTTATATCGACGTGTCGTCGAAGGCGCTCGCGGAACGCGGGCTTACGCTGGTTGACCTACAGAATGCCCTCAAGGGCCAGAACACCGTCGATCCGGCCGGCACAGTCGATACCGGCACACACTCCGTTCGCATCTCCGTCGAGGGCGACGTCAAGCGGGCGGGCGACATCAAGGAATTGCGCCTGCGCACCGGCAGTCAAGTTACCCGGCTGGGCGACATCGCCACGGTGACGACCGGCCTGCAGGACCCCGAGCAACGCAAGTTCCGCTTCGACGGTCATGACAGCGTGCAGATCGGCGTCGTCATGGCGAAGGGTTTCAAGGTCACCGACGTCGGCACAGCGATCGAGGAAACCTATCAGCGGTTCGAAGCCGCCCTGCCCTACGGCGTCGCAGTGGACCAGATTGCCAACCAGCCGCATGTGGTAACGGACGCCATCGGCGAGTTCATGCGTGCGCTGGGCGAAGCGTTGGTCATCGTGCTCGCAGTCTCTTTCCTGTCCATCGGCTGGCGCTCGGGCCTCGTTATCGCCATCGCCATCCCTCTGGTGCTCGCCGCCACCTTTGCCATCATGTACGAGCTTGGCATCGACCTCCAGCGCATCTCGCTCGGCGCGCTCATCATCGCGCTTGGCCTGTTGGTCGACGATGCGATGATCGTGGTGGAACTGATGGAGCGCAAGCTGGAAGAAGGGCTGGAAAAGCTCGATGCCGCGAGCTTTGCCTACAGTTCGACGGCCTTTCCGATGCTGACCGGCACGCTCATCACCACAGCCGGCTTTATTCCGGTCGGCTTTGCCGCATCGGCCGCCGGCGAATATGTCCGTTCGCTGTTCTACGTGGTCGGTATTGCGCTGGTCGTGTCATGGTTCGTGGCCGTCTACTTTACACCGTGGCTGGGCTACATGATCCTGAAGCAGCGCCGCCACGCCGGTGGCGAACATCACGACGTGTTCGACACCGGCTTCTACCGCCGCCTCAGGTCGACCATCGGCTGGGCAGTGCGCCACCGTATCATGGTGCTGGTGCTGACGCTG
PROTEIN sequence
Length: 540
MTTSTDEKKPFNLSRWAIGHPSIARFLVGLIIVAGALGLMRMGQREDPDFTFRVMVVQAVWPGASLTDMEDQVVNKIERKLQETPHLDFVKSYSRAGSAIIMVQVKGDTDAAQVADAFYQVRKKVGDIRSELPSGLLGPFFNDEFGDTFITLHSISGDGYSYPELKQFAIQARDMLLTTPGVEKAVIIGDQPQVIYIDVSSKALAERGLTLVDLQNALKGQNTVDPAGTVDTGTHSVRISVEGDVKRAGDIKELRLRTGSQVTRLGDIATVTTGLQDPEQRKFRFDGHDSVQIGVVMAKGFKVTDVGTAIEETYQRFEAALPYGVAVDQIANQPHVVTDAIGEFMRALGEALVIVLAVSFLSIGWRSGLVIAIAIPLVLAATFAIMYELGIDLQRISLGALIIALGLLVDDAMIVVELMERKLEEGLEKLDAASFAYSSTAFPMLTGTLITTAGFIPVGFAASAAGEYVRSLFYVVGIALVVSWFVAVYFTPWLGYMILKQRRHAGGEHHDVFDTGFYRRLRSTIGWAVRHRIMVLVLTL