ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3321_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2115..3254)

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIF8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 379.0
  • Bit_score: 679
  • Evalue 1.00e-192
Inner-membrane translocator {ECO:0000313|EMBL:CCV16166.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 379.0
  • Bit_score: 679
  • Evalue 1.50e-192
ABC-type uncharacterized transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 379.0
  • Bit_score: 678
  • Evalue 8.60e-193

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGAGCACCCCTTACGCCAAGCTTCCCGCCTGGGCCGATTACGGCCTGATCCCGCTGATCAACCTGGCGGTCGCCTTCATCGTCGCCGGTTTCGTCGTGCTTCTGGTCGGTGAGAACCCGTTTCGCGCGGCCGCCATTCTCGTCGAAGGCGCGTTCGGGCGCGGGCAGGGCATCGCCTTTACGCTGTACTACGCCACCACCTTCATTTTCACCGGCCTATCGGTTGCCGTGGCCGTACATTGCGGGTTGTTCAACATCGGCACCGAGGGTCAAGCCTATATTGCCGGCCTCGGCGTCGCGGTGGTCTGTCTCACATTCGACGCCACCTTGCCGTGGTGGCTGACCTTTCCGCTGGCAACGCTAGCGGCGGCGGCGATGGGAGCGCTGTGGGCGCTGCTTCCGGCCTATCTTCAGGCCAAGCGCGGCTCGCACATCGTCATCACCACCATCATGTTCAACTTCATCGCCGCTTCGATCATGGTGTACCTGCTCGTCGGCATGTTGAAGCCCGTCGGCTCGATGGCCCCGCAAACGCGCATCTTCCTTGAAGGGGCGCAACTGCCAAAACTCAACTGGGTCATCGAACTGTTTGGCGCCCGCGTGCGTTCGGCCCCACTCAACATTTCCTTCCTGCTCGCTCTCTTGATGGCCTTCCTGACATGGGTGCTGATCTGGCGCACGCGGCTCGGCTACGAGATCCGCACCTACGGACACAGCCCCAAGGCGGCGCGCTATGCCGGTATTTCGGAAACCCGCATCATCATCATCACCATGATGATCTCCGGTGCGCTGGGCGGCATGATGGCGCTCAACCCGACCATGGGCGACCAGCACAATGTGGCGATCGATTTCGTCAGCGGAGCCGGCTTCGTCGGCATCGCCGTGGCGCTTATGGGGCGCTCGCATCCAGTCGGCATCGTGCTCGCCGCAATCCTGTTCGGCATGCTCTATCAGGGCGGGGCGGAGTTGGCCTTTGAAATGCCTGCGATCAGCCGAGACATGATCGTCATCATCCAGGGGCTGGTCATCCTGTTCGCCGGTGCGCTGGAGCACATGTTCAGGCCGTCGATCCAGGCACTGTTCGCGTCGTTCAGTCCGAAGTCCGTCGGCATGGCTGCGGCCAAGGGCAAGGGGGCGTAG
PROTEIN sequence
Length: 380
VSTPYAKLPAWADYGLIPLINLAVAFIVAGFVVLLVGENPFRAAAILVEGAFGRGQGIAFTLYYATTFIFTGLSVAVAVHCGLFNIGTEGQAYIAGLGVAVVCLTFDATLPWWLTFPLATLAAAAMGALWALLPAYLQAKRGSHIVITTIMFNFIAASIMVYLLVGMLKPVGSMAPQTRIFLEGAQLPKLNWVIELFGARVRSAPLNISFLLALLMAFLTWVLIWRTRLGYEIRTYGHSPKAARYAGISETRIIIITMMISGALGGMMALNPTMGDQHNVAIDFVSGAGFVGIAVALMGRSHPVGIVLAAILFGMLYQGGAELAFEMPAISRDMIVIIQGLVILFAGALEHMFRPSIQALFASFSPKSVGMAAAKGKGA*