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SCN18_30_10_14_R5_P_scaffold_8258_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 165..809

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE2408 related cluster n=1 Tax=unknown RepID=UPI0003CE2408 similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 214.0
  • Bit_score: 357
  • Evalue 8.80e-96
DNA-binding protein {ECO:0000313|EMBL:ESW84015.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 214.0
  • Bit_score: 357
  • Evalue 1.20e-95
repressor protein CI similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 214.0
  • Bit_score: 349
  • Evalue 4.00e-94

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCTCTCGCATGACGGTGTTTGGGCTGCCATTGACGCGCTCGCGGAGCGCTATTCGCTGTCGGTATCGGGCCTTGCCCGGCGCGCGGGACTGGATTCGACGGCCTTCAACAAGTCGAAGCGGCTGTCGTCAGACGGTCGTCCGCGCTGGCCTTCGACGGAATCGCTGGCCAAGATCATGGAGGCGACCGGGGCGTCGCTGGACGAGTTCATGAAGCTGCTCGGCACGCGCCCGGACGCCGATGGCCTGCCGGTGCAGCGCCCCACCGTGCCGTTGGTGGGCTTTGCCCAGGCAGGAGCTGGCGGCTTCTTCGACGATGCGGGATTTCCGGTCGGCCATGGCTGGGATCTTGTCGAACTGCCGGCGCAATCGACGGCGGCGTCCTATGCGCTGAAGGTGCAGGGTGATTCCATGCTGCCGCTCTACCGCAATGGCGATGTCCTGATCGTGGAGCCCGGCGCGCGCGTCCACAAGGGCGACCGCGTCGTCGTCAAGACGACGGCCGGCGAGGTGATGGCCAAGGTTTTGAGCCGACAGACGGAAAAGTCGATCCTTCTCGTTTCTTTGAACCCGGAACATCCGAATCGCGACATTCCTGCTCACGAGATCGAATGGGTGGCGCGGATCGTCTGGGCGAGCCAGTAG
PROTEIN sequence
Length: 215
MLSHDGVWAAIDALAERYSLSVSGLARRAGLDSTAFNKSKRLSSDGRPRWPSTESLAKIMEATGASLDEFMKLLGTRPDADGLPVQRPTVPLVGFAQAGAGGFFDDAGFPVGHGWDLVELPAQSTAASYALKVQGDSMLPLYRNGDVLIVEPGARVHKGDRVVVKTTAGEVMAKVLSRQTEKSILLVSLNPEHPNRDIPAHEIEWVARIVWASQ*