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SCN18_30_10_14_R5_P_scaffold_1180_14

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(10125..11564)

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein CpaC n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G6C6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 483.0
  • Bit_score: 670
  • Evalue 8.00e-190
Pilus assembly protein CpaC {ECO:0000313|EMBL:ESY23324.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 483.0
  • Bit_score: 670
  • Evalue 1.10e-189
Flp pilus assembly protein, secretin CpaC similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 471.0
  • Bit_score: 651
  • Evalue 1.40e-184

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGGCGTTTGTATATCTAAGGCGTATGGCCGCTGTGCTGGCGCTGGCAATGCCTCTTTGCGTAGGTTTCGCTGCCGGCGCCAGGAGCCAGCAGATCGACCTGACCAATGCCACCGTGCACCGCGTGTTCGTGCCGATCTCGCAGTCGCGGACGGTGAGCGTGAACCGCAACCTGGGCGACATCATCATTGCCGACGACAAGATCGCCGACGCCCAGCCAATGACCGACCGCAGCCTCTATATCATCGGCAAGGGCGTGGGCACGACAACGGTCAATCTGTTTTCCGAAGACAAACGCCCGCTCGGCGTGATCGAGATCGAGGTCGGGCTGGACGTCAAGGATATGGCGCAAGCCATCCAGCAGGTCGTTCCCGGCGCAAAGGTGCGCGTAGGATCGGTCAACGGCAAGGTTCGCCTCGCCGGCAAAGTCAAGGACGCGGTGGCGATGAACAAGGTTCTCGACATCGCCCAGCAATATGGCCCCGAGGCGGTGATCAACGCCATGGAGGTGGAGGACAGCCAGCAGGTCAACCTGGAAGTGCGCGTGCTGGAAGCCAAGCGCAATGTCGGACGCGACCTCGGCGTGTCACTGCGTGCCGGCGAACCGGGAAAATTCACGGGCGGCACTGGTGTTGCAACAACCGATAGCGACGGCGTGGTACTTGGAACCGGTGACCTGATCAGTGGCGTGCTTTCCGGCGCCAGCCCAATGGGCGCGCTGATCGCGCGGGTGGTGGACAGCGATGTCAGCGTCGACCTCATCATCGAGGCGCTGGAAGCCAAGGGCGTGGTGCGCACGCTGGCCGAGCCGAACCTGACCACGCTTTCCGGCGAACCGGCCAGCTTCAACGCCGGTGGCGAAGTGCCGGTGCGGCGCGAGAACTCGGATGGCGAAGTGGTCATCGAGTACAAGCAGTTCGGCGTGAACCTGAATTTCACGCCGGTGGTTCTCGACAACTCCAAGATCAATATCCGGCTGCAACCTGAGGTCAGCGACCTGACGGGCTTCTCGACCGCAGGCGACCCGATCTTCACCAACCGCAAACTTTCCACTGTCGTGGAACTGCGGGACGGGCAAAGCTTTGCGCTGGCCGGGTTGATGTCGAGCAAGAACACCAAGATCCAGAACCAGGTGCCGTGGCTCGGCCAGGTGCCGATCGTCGGCGCGCTGTTCCGCAATTCGAGCACGCAGAAGGAAGAGACCGAACTGGTGGTGATCGTAACGCCACGGCTTGTGCGCCCTGCCGGACCGTCGGAGCGGGTGGCCACGCCGTTCGACAAGACGCGCTCTGCGAACGATGCGGAATTCTTTGCGCTCGGCCAATTGGAAGTCACCAAGGACATGGTTCGCAACTACGAACTCGGCAAAGGCGTGATCGGCCCGTACGGGCACATGCTCGACCTCTCGCCCAAGGACAAGATGATCTATGTCAAGAAATAG
PROTEIN sequence
Length: 480
MAFVYLRRMAAVLALAMPLCVGFAAGARSQQIDLTNATVHRVFVPISQSRTVSVNRNLGDIIIADDKIADAQPMTDRSLYIIGKGVGTTTVNLFSEDKRPLGVIEIEVGLDVKDMAQAIQQVVPGAKVRVGSVNGKVRLAGKVKDAVAMNKVLDIAQQYGPEAVINAMEVEDSQQVNLEVRVLEAKRNVGRDLGVSLRAGEPGKFTGGTGVATTDSDGVVLGTGDLISGVLSGASPMGALIARVVDSDVSVDLIIEALEAKGVVRTLAEPNLTTLSGEPASFNAGGEVPVRRENSDGEVVIEYKQFGVNLNFTPVVLDNSKINIRLQPEVSDLTGFSTAGDPIFTNRKLSTVVELRDGQSFALAGLMSSKNTKIQNQVPWLGQVPIVGALFRNSSTQKEETELVVIVTPRLVRPAGPSERVATPFDKTRSANDAEFFALGQLEVTKDMVRNYELGKGVIGPYGHMLDLSPKDKMIYVKK*