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SCN18_30_10_14_R5_P_scaffold_10517_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(36..740)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000377F5AF similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 230.0
  • Bit_score: 343
  • Evalue 1.40e-91
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AID33084.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 230.0
  • Bit_score: 343
  • Evalue 2.00e-91
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 230.0
  • Bit_score: 342
  • Evalue 9.00e-92

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
GTGAATCTGTCTGTGATATATCAGAAACATATCAAGGAGATTTCATTGGCATTGACCGAGGAAAGCACCGGTTCCGAGCCCGCGGCCGCCAGGGCCTATCATGCGCTGGAGCGCATGATCGTGACGCTGGAACTGTCGCCCGGCAGTTTCGTCACCGAAGGGTCGATCATCGATAAACTCGGGCTCGGCCGCACCCCGGTGCGCGAAGCGATCCAGCGCCTGGCCTGGGAGGGTTTGCTGGAGGTCAGGCCTCGTGCAGGCATTGCCGTCGCTGCACTTCACGCTGGCGATTGGTTGCGCGTCATCGATGCTCGTCGCGGCGTCGAAATCGTACTTGCCCGTTCCGCTGCTCGTTTTGTGACACGGGAAGCGGCCGACGGTTTTCATGCCGCAGCACTCTCCATGCAGAGGGCGGTCATTGCTGGCGACGTGCTTGCTTTCCTCACCGCCGACAAGGCGATGGACGAGGCGCTTGCGCGTGCGGCAGACAATGTCTTCGCCGCCCGAGTCGCAGCGCCGTTGCAGACTCACAGCCGCCGCTTCTGGTATCGCTACCGGGCGGACACCGGCCTGGCGGATTCCGCTGCCCACCACGTCGCCCTGATCCAGTCGATACTGGACGGAGACGAGGAGGCCGCCGCCGCAAATGCCGACCGCCTCATGAGCCTGTTGCGTTCCCTGGCCGAGGCGGCGGCGACGCGCTGA
PROTEIN sequence
Length: 235
VNLSVIYQKHIKEISLALTEESTGSEPAAARAYHALERMIVTLELSPGSFVTEGSIIDKLGLGRTPVREAIQRLAWEGLLEVRPRAGIAVAALHAGDWLRVIDARRGVEIVLARSAARFVTREAADGFHAAALSMQRAVIAGDVLAFLTADKAMDEALARAADNVFAARVAAPLQTHSRRFWYRYRADTGLADSAAHHVALIQSILDGDEEAAAANADRLMSLLRSLAEAAATR*