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SCN18_30_10_14_R5_P_scaffold_14571_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(250..1056)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 268.0
  • Bit_score: 333
  • Evalue 2.40e-88
ABC transporter of mannopine, nucleotide binding/ATPase protein n=1 Tax=Rhizobium radiobacter RepID=K7WT21_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 268.0
  • Bit_score: 333
  • Evalue 1.70e-88
spermidine/putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 268.0
  • Bit_score: 298
  • Evalue 1.30e-78

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGAGCGTAGCAACGAACATCGCCTATCCCCTCAAGATCAGAAAATGGCCCAAGGACAAGATTGCAGCCGCCGTTGATGAGGTGCTGGCAACAGTGCAGCTCTCTGGCTACCAGGCGCGACGCATATCCGAGCTATCGGGCGGACAAAAGCAGCGCGTTGCACTGGCTCGCGCGATCGTTTTCAAACCCAAGATCCTGCTCATGGACGAGCCGCTTTCAGCGCTCGACAAGAACCTTCGCGAACTCATGCAACTCGAGTTGCGGAATATGCATGAGCGACTCGGTATGACGACTGTCCTCGTGACCCACGACCAGCGTGAGGCGCTCACGATGTCTGATCGCGTCGCGGTTCTTCGGAACGGCGAAATTGCGCAGATCGGGACTTCAACCACCCTTTACAATGCACCCGAGACCGCCTTCATCGCTGCCTTCCTCGGCGAGTCCGCATTCCTCCACGTCTCTGCGCGTGGTGGCATTCATTACTACCGTGAGCAAGCAATCAAGGTTGCGGACGGCCAGGCGATACCCGAGGCCGGCCTGCTGGTGTTGCGACCAGAGAAACTTCAAGTCGCGGACGGCGCTGAGAAGCTCCCCGACTACAATTACTTCGACGGTGTGCTGGAGCGGGTGCTCTTCCAAGGCGAAAGCAGTGTGGCGTTCGTCCGCCTCGTCGGCGGCGAACTCGTTCTAGTCCGACGCCAACTGAACGAAAGCAGCAGCCTCAATGTGTCGGCGCCCGGCAGCCAGCTCGTTCTCAGTCTGCACAAGAACGACAGTCGGGTCGTTCGTGATGACATGAAGCGCTGA
PROTEIN sequence
Length: 269
MSVATNIAYPLKIRKWPKDKIAAAVDEVLATVQLSGYQARRISELSGGQKQRVALARAIVFKPKILLMDEPLSALDKNLRELMQLELRNMHERLGMTTVLVTHDQREALTMSDRVAVLRNGEIAQIGTSTTLYNAPETAFIAAFLGESAFLHVSARGGIHYYREQAIKVADGQAIPEAGLLVLRPEKLQVADGAEKLPDYNYFDGVLERVLFQGESSVAFVRLVGGELVLVRRQLNESSSLNVSAPGSQLVLSLHKNDSRVVRDDMKR*