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MPI_scaffold_3877_3

Organism: MPI_Nov_34_17_partial

partial RP 3 / 55 BSCG 5 / 51 MC: 1 ASCG 1 / 38
Location: comp(1057..1638)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 182.0
  • Bit_score: 152
  • Evalue 1.40e-34
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily alias=ACD7_C00147G00004,ACD7_353.12386.76G0004,ACD7_353.12386.76_4 id=131072 tax=ACD7 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 208
  • Evalue 2.40e-51

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 582
ATGGTTACAGGTTCAAAGTGTATTAATAAAACCGATGAACAGTTAGTAGTCCTGACTTTAAAAAATCAGGATTACTATCTATGTCTAATGAAACGTTATGAAGCGAGGCTTCTTAATTATATTTTAAAAATATCTAATATAAGCAGAGAAGATGGAGAAGATATTCTACAGGAAGTATTTGTCAAAGCTTATCAAAACTTAAATGATTTTGATTTAAATTTTAAATTTTCTAACTGGATATATAGTATTGCTCATAATGCTACTATTAGTGCTTTCAGAAAGAAAAAGGTGCGTCCCCAAACAGTTTCCTGGGAAGATAAAGATTTAAATAACATATTGAAATCTACCTTAGACGTAGAAAATACAAGCCTTCAAAAATTAACTTATAAACAGATTTTAAAAATAATTAATCAATTGCCTTTAAAATACAAAGATGTATTAATCCTAAAGTTTGTGGAAGGAAAAGATTATCGGGAGATAAGTGATATTTTGCGCAAACCGATGGGCACTATAGCTACTCTGATAAACCGGGCTAAAAAATCTCTTAAACAGGAGTTAGAAAAGGAGGATATTAAACTCTAA
PROTEIN sequence
Length: 194
MVTGSKCINKTDEQLVVLTLKNQDYYLCLMKRYEARLLNYILKISNISREDGEDILQEVFVKAYQNLNDFDLNFKFSNWIYSIAHNATISAFRKKKVRPQTVSWEDKDLNNILKSTLDVENTSLQKLTYKQILKIINQLPLKYKDVLILKFVEGKDYREISDILRKPMGTIATLINRAKKSLKQELEKEDIKL*