ggKbase home page

2019_SCN_bioreactor_t2_biofilm_scaffold_29413_8

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(4371..5120)

Top 3 Functional Annotations

Value Algorithm Source
Probable transcriptional regulatory protein Gdia_1219 n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZH35_GLUDA similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 249.0
  • Bit_score: 399
  • Evalue 1.40e-108
Probable transcriptional regulatory protein Asru_0431_03 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 249.0
  • Bit_score: 406
  • Evalue 1.60e-110
Putative cytosolic protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 249.0
  • Bit_score: 399
  • Evalue 3.90e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCTGGGCATTCGCAGTTCAAGAACATCATGCATCGCAAGGGTGCGCAGGATGTGAAGCGTGCGCGGGCGTTTGCGAAGTTGATTCGCGAGATCACGGTATCGGCGCGGCAGGGTTTGCCGGACATGGCGGCCAATCCGCGGCTGCGGTCGGCGGTGCTGGCGGCGCGCAAGGAGAACATGCCGAAGGACACGATCGACCGCGCCATCAAGAAGGCGAGCGGGGCCGGCGGCGGCGATGATTATGCCGAGGTCCGGTATGAGGGCTATGGCCCGGCCGGGGTGGCGGTGATCGTGGAGGCGCTGACCGACAACCGCAATCGCACCGCGAGCGACGTGCGCAGCGCCTTCGCCAAGCATGGCGGGGCGTTGGGCGAGACCAACAGCGTTTCTTTTATGTTCTCCCGGCTCGGAGTCGTGCGCTATCCCGCTTCGGCGGCCAGCGAGGACGACATGCTGGAGGCGGCGGTCGAGGCGGGGGCCGAGAACGTGGTGAGCGGGCCGGAGGGGCACGAGGTGACGACGCCGGTGGAGGATTTCTTCGCCGTGCGCGATGCGCTGGAGGCGCGGTTCGGCGAGGCGGAGGAGGCCAAGCTGGACTGGCGGCCGAATGTGTCGGTGACGCTGGACGAGGACAAGGCCGCCGGGCTGCTGAAGCTGCTGGATGTGCTGGAGGAGAACGACGACGTGCAGAACGTCTACGCCAATTTCGACATCCCCGAGGCCGTGATGGCGAAGCTGTCGGCCTGA
PROTEIN sequence
Length: 250
MAGHSQFKNIMHRKGAQDVKRARAFAKLIREITVSARQGLPDMAANPRLRSAVLAARKENMPKDTIDRAIKKASGAGGGDDYAEVRYEGYGPAGVAVIVEALTDNRNRTASDVRSAFAKHGGALGETNSVSFMFSRLGVVRYPASAASEDDMLEAAVEAGAENVVSGPEGHEVTTPVEDFFAVRDALEARFGEAEEAKLDWRPNVSVTLDEDKAAGLLKLLDVLEENDDVQNVYANFDIPEAVMAKLSA*