ggKbase home page

2019_SCN_bioreactor_t2_biofilm_scaffold_68963_3

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 1188..1751

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89C14_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 187.0
  • Bit_score: 272
  • Evalue 2.50e-70
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 187.0
  • Bit_score: 272
  • Evalue 7.00e-71
Transcriptional regulatory protein {ECO:0000313|EMBL:BAR55395.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 187.0
  • Bit_score: 272
  • Evalue 3.50e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGTTCGAATGTGAAGGAGGCGATCCTGTCCGCAGCCCGGAAAGCGGCGCAGGCGCATGGATATGGCGGCCTGAACTTCCGCGAGCTGGCGGCTGAAGTTGGAATCAAGGCCGCGAGTATCCACTATCATTTCCCGAGCAAGGCCGACCTCGGTGCGGCCGTCGCGAGGCGCTATTGGGAGGACATTGCGGCTGAGCTGGAGGCGATGCAGGCCGAGTTGCCCGACGCGACCGCCTGCCTGCAGCACTATCCTGCGATATTCCGCCGGTCGCTCGAGAACGGCAACCGCATCTGCCTTTGCAGCTTCATGGCCGCGGAATATGACGACCTGCCGGAACCGGTAAAGGTGGAAGTGCAGGCTTTCGCGGACGTCAACGTCACGTGGCTGGCCAAGGCGCTGAGCACCGCCGAGGGGGGCGATGCATCGACGGGCAGCGCCCGCGCTCTCGCCATTTTTGCCGCCGTGTCCGGCGCTCAGCTTCTGGCGCGGAGCCGCGCGGATGTCGGTCTTTTCGATAGCCTCATCGGCAGCTATCGCGATACAGGGCTCTTGCCGGGCTGA
PROTEIN sequence
Length: 188
MSSNVKEAILSAARKAAQAHGYGGLNFRELAAEVGIKAASIHYHFPSKADLGAAVARRYWEDIAAELEAMQAELPDATACLQHYPAIFRRSLENGNRICLCSFMAAEYDDLPEPVKVEVQAFADVNVTWLAKALSTAEGGDASTGSARALAIFAAVSGAQLLARSRADVGLFDSLIGSYRDTGLLPG*